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The map label for this gene is cpcT1

Identifier: 113474772

GI number: 113474772

Start: 1545005

End: 1545634

Strand: Reverse

Name: cpcT1

Synonym: Tery_0979

Alternate gene names: 113474772

Gene position: 1545634-1545005 (Counterclockwise)

Preceding gene: 113474773

Following gene: 113474771

Centisome position: 19.94

GC content: 38.1

Gene sequence:

>630_bases
ATGATAACTTCAAATTTTAAAACACAAGAAAATGTAAGTCAAGCTATTACATTAGCCAGTTGGTTGGCTGGTGAATATAG
TAGTATCAAATACACTTTAGAAGATGCTCGAACTAATCCTCATATTCGTATCTTTTTCCGTCCCTTACCGTATGATTTTT
TTGGTGGGATAGGTTTTTATTCTGAGGAGATTTATGATCACGATCCTTGGCATCCTCATTATCAGTTTGTCAAACGAGTT
ATTCCTCAAGGGGATAGTGTTAGGGTCGAAAATTATGCCCTAAAAGATCCAGACTTGCATACGGGGGCGGGACAAGATTT
GGAAATTCTGGCAACCCTTACTCCTGATAACATTGAACTTCGTAAAGGGTGTGCAATGATTTTCAAACGTCAAGGGGATA
CTTTTGTAGGAGGAGTTGAACCTGGTCATAAGTGTTTAATTCCTCGTGGGGATGGTTCAATGACTTATTTAGTTAGTGAA
GTGAAAGTTACTCAAAAAACCTGGACTAGCAGAGATACAGGTTATGATGTCAATACTCATGAAAAAATCTGGGGGTCAAA
TAGCGGTCCGTTCAAATTTGATAAGGTCCAAGATTTTTCCGGTGAAATTCCTGATATTGCTATTCTTTGA

Upstream 100 bases:

>100_bases
CATGGCTGCCTCAAAAGTCAAAACTCGTTATTAATTAATTTAGGTATTAAAACTCAAAAACTTGTAATTGGCAAAATTAT
AAAACAAACTTTTTTTGGTT

Downstream 100 bases:

>100_bases
TATACTCCCTAAGGTAAATGTGTGGGGACTATTGCTTAAATAGTGATCTATGTGAATGATAGAACTTACTAAATTTAGTA
AGACTACCAGGACTTACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MITSNFKTQENVSQAITLASWLAGEYSSIKYTLEDARTNPHIRIFFRPLPYDFFGGIGFYSEEIYDHDPWHPHYQFVKRV
IPQGDSVRVENYALKDPDLHTGAGQDLEILATLTPDNIELRKGCAMIFKRQGDTFVGGVEPGHKCLIPRGDGSMTYLVSE
VKVTQKTWTSRDTGYDVNTHEKIWGSNSGPFKFDKVQDFSGEIPDIAIL

Sequences:

>Translated_209_residues
MITSNFKTQENVSQAITLASWLAGEYSSIKYTLEDARTNPHIRIFFRPLPYDFFGGIGFYSEEIYDHDPWHPHYQFVKRV
IPQGDSVRVENYALKDPDLHTGAGQDLEILATLTPDNIELRKGCAMIFKRQGDTFVGGVEPGHKCLIPRGDGSMTYLVSE
VKVTQKTWTSRDTGYDVNTHEKIWGSNSGPFKFDKVQDFSGEIPDIAIL
>Mature_209_residues
MITSNFKTQENVSQAITLASWLAGEYSSIKYTLEDARTNPHIRIFFRPLPYDFFGGIGFYSEEIYDHDPWHPHYQFVKRV
IPQGDSVRVENYALKDPDLHTGAGQDLEILATLTPDNIELRKGCAMIFKRQGDTFVGGVEPGHKCLIPRGDGSMTYLVSE
VKVTQKTWTSRDTGYDVNTHEKIWGSNSGPFKFDKVQDFSGEIPDIAIL

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPXT1_TRIEI (Q117G4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_720833.1
- STRING:   Q117G4
- GeneID:   4245428
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_0979
- NMPDR:   fig|203124.1.peg.4176
- eggNOG:   NOG47328
- HOGENOM:   HBG709119
- OMA:   WISRDRG
- ProtClustDB:   CLSK524476
- BioCyc:   TERY203124:TERY_0979-MONOMER
- HAMAP:   MF_01460
- InterPro:   IPR010404

Pfam domain/function: PF06206 DUF1001

EC number: NA

Molecular weight: Translated: 23668; Mature: 23668

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSNFKTQENVSQAITLASWLAGEYSSIKYTLEDARTNPHIRIFFRPLPYDFFGGIGFY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCC
SEEIYDHDPWHPHYQFVKRVIPQGDSVRVENYALKDPDLHTGAGQDLEILATLTPDNIEL
HHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEH
RKGCAMIFKRQGDTFVGGVEPGHKCLIPRGDGSMTYLVSEVKVTQKTWTSRDTGYDVNTH
HHHHEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCC
EKIWGSNSGPFKFDKVQDFSGEIPDIAIL
HHHCCCCCCCEEECCCCCCCCCCCEEEEC
>Mature Secondary Structure
MITSNFKTQENVSQAITLASWLAGEYSSIKYTLEDARTNPHIRIFFRPLPYDFFGGIGFY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCC
SEEIYDHDPWHPHYQFVKRVIPQGDSVRVENYALKDPDLHTGAGQDLEILATLTPDNIEL
HHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEH
RKGCAMIFKRQGDTFVGGVEPGHKCLIPRGDGSMTYLVSEVKVTQKTWTSRDTGYDVNTH
HHHHEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCC
EKIWGSNSGPFKFDKVQDFSGEIPDIAIL
HHHCCCCCCCEEECCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA