Click here to switch to the map view.

The map label for this gene is xylB [H]

Identifier: 113474767

GI number: 113474767

Start: 1534516

End: 1535817

Strand: Reverse

Name: xylB [H]

Synonym: Tery_0974

Alternate gene names: 113474767

Gene position: 1535817-1534516 (Counterclockwise)

Preceding gene: 113474771

Following gene: 113474761

Centisome position: 19.82

GC content: 36.25

Gene sequence:

>1302_bases
ATGAACTTATACCTAGGAATTGATTTTGGCACTTCCGGAGCGCGTGCTGTTGTTATTGACTCTAATTTTCGGGTTAAAGC
ACAAACAAAATATATTTGGGAAACTGAGGAAAATAAATTACCTCATGTTTGGCAAAAAGCTCTGTTTAATCTTATTTCTA
ATATTCCTCAGGAAATACGAAGAAAAATTCGAGCGATCGCTATTGATGGTACTTCGGCAACTGTATTATTGTGCAATAGT
GATGGTAAACCTGTGACTGAAACGCTACTTTATAATGATAGTAGAGGGGTGACAATGATGAATAAATTGAAAAGTATTGC
CCCTTCTAATCATTCTGTTATTAGCGTCACCTCTAGTTTCGCAAAATTGTTATGGTTGACTGAAAATACTTCTACCTTAA
ATCAAAATCAAACATATTATTTTTTGCATCAAGCTGACTGGCTAGGGTTTTTGCTTCATGGAAAACTAGGAGTAAGTGAC
TATAACAATGTTTTGAAACTAGGTTATGATGTAAACGACTTATGTTATCCAGACTGGTTAAATAATTTTGTTAATTCTGA
GGTTGGGAAAAATATTCAGTTACCAGAAGTAGTTAAACCAGGTGCGACCGTCGACAGTGTCACAACAGAAATAGTTAATA
ATTTTGGCTTGTCTCCTGAATGTGTTGTTTGTGGCGGTACAACAGATAGCATTGCAGCTTTTATCGCCAGTGGTGCTAAT
AGTCCTGGAGAAGCCGTAACTTCTTTAGGTTCAACTTTGGTATTGAAACTATTGAGTCATACTAGAGTTGATAATAGTAA
ATATGGCATTTATAGTCATCGCTTCGGAAATTTGTGGTTAGTAGGAGGTGCTTCTAATACTGGAGGTGCTGTTTTGCGAC
ATTTTTTTACTGAAGCTGAGTTGGAAAGTTTGAGTAGGCAAATAGACCCTAATATTGAAAGTAGATTAGATTATTATCCT
TTGCTAGAAAAGGGCGATCGCTTTCCTATTAATGATCCGGAATTACTCCCAAAACTAGCCCCTAGACCAGAAAATTCCAT
ATTATTTCTTCATGGTTTACTTGAAGGTATTGCTAAAATTGAATTACGAGGATATGAATTGTTGCAAGCATTAAGCGCAG
ATACACTTACCAAGGTTTATACCGCCGGAGGTGGTGCCAAGAATTCTACTTTTACCACAATTCGGGGACGTTATTTAGGA
GTACCTACAATTAAAGCTGTTTATACAGATGCAGCTTATGGTAGTGCTATTTTGGCAACTCATCAGTTTATTTCTGATCA
AACTAACTTAACTGGACTTTAA

Upstream 100 bases:

>100_bases
GTTCTATGAAACCTTTCCCTGTTTGATAAGTCAAGCTTTTTAGCCTGTACTTAGATAATTGCTATATACACTTTAAAATG
ATAGCAGATATTTGTTGAAA

Downstream 100 bases:

>100_bases
GAAAAAATGCAGTCAAGTCAGTTTTAGTGTAGATATTGTATATTATGGCTTTCAATAGAAAATGCTAGCCGATGAAAGAA
ATAACCTTGTGTGCCCTACC

Product: carbohydrate kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNLYLGIDFGTSGARAVVIDSNFRVKAQTKYIWETEENKLPHVWQKALFNLISNIPQEIRRKIRAIAIDGTSATVLLCNS
DGKPVTETLLYNDSRGVTMMNKLKSIAPSNHSVISVTSSFAKLLWLTENTSTLNQNQTYYFLHQADWLGFLLHGKLGVSD
YNNVLKLGYDVNDLCYPDWLNNFVNSEVGKNIQLPEVVKPGATVDSVTTEIVNNFGLSPECVVCGGTTDSIAAFIASGAN
SPGEAVTSLGSTLVLKLLSHTRVDNSKYGIYSHRFGNLWLVGGASNTGGAVLRHFFTEAELESLSRQIDPNIESRLDYYP
LLEKGDRFPINDPELLPKLAPRPENSILFLHGLLEGIAKIELRGYELLQALSADTLTKVYTAGGGAKNSTFTTIRGRYLG
VPTIKAVYTDAAYGSAILATHQFISDQTNLTGL

Sequences:

>Translated_433_residues
MNLYLGIDFGTSGARAVVIDSNFRVKAQTKYIWETEENKLPHVWQKALFNLISNIPQEIRRKIRAIAIDGTSATVLLCNS
DGKPVTETLLYNDSRGVTMMNKLKSIAPSNHSVISVTSSFAKLLWLTENTSTLNQNQTYYFLHQADWLGFLLHGKLGVSD
YNNVLKLGYDVNDLCYPDWLNNFVNSEVGKNIQLPEVVKPGATVDSVTTEIVNNFGLSPECVVCGGTTDSIAAFIASGAN
SPGEAVTSLGSTLVLKLLSHTRVDNSKYGIYSHRFGNLWLVGGASNTGGAVLRHFFTEAELESLSRQIDPNIESRLDYYP
LLEKGDRFPINDPELLPKLAPRPENSILFLHGLLEGIAKIELRGYELLQALSADTLTKVYTAGGGAKNSTFTTIRGRYLG
VPTIKAVYTDAAYGSAILATHQFISDQTNLTGL
>Mature_433_residues
MNLYLGIDFGTSGARAVVIDSNFRVKAQTKYIWETEENKLPHVWQKALFNLISNIPQEIRRKIRAIAIDGTSATVLLCNS
DGKPVTETLLYNDSRGVTMMNKLKSIAPSNHSVISVTSSFAKLLWLTENTSTLNQNQTYYFLHQADWLGFLLHGKLGVSD
YNNVLKLGYDVNDLCYPDWLNNFVNSEVGKNIQLPEVVKPGATVDSVTTEIVNNFGLSPECVVCGGTTDSIAAFIASGAN
SPGEAVTSLGSTLVLKLLSHTRVDNSKYGIYSHRFGNLWLVGGASNTGGAVLRHFFTEAELESLSRQIDPNIESRLDYYP
LLEKGDRFPINDPELLPKLAPRPENSILFLHGLLEGIAKIELRGYELLQALSADTLTKVYTAGGGAKNSTFTTIRGRYLG
VPTIKAVYTDAAYGSAILATHQFISDQTNLTGL

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 47447; Mature: 47447

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYLGIDFGTSGARAVVIDSNFRVKAQTKYIWETEENKLPHVWQKALFNLISNIPQEIR
CEEEEEEEECCCCCEEEEEECCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RKIRAIAIDGTSATVLLCNSDGKPVTETLLYNDSRGVTMMNKLKSIAPSNHSVISVTSSF
HHHEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEHHHH
AKLLWLTENTSTLNQNQTYYFLHQADWLGFLLHGKLGVSDYNNVLKLGYDVNDLCYPDWL
EEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHH
NNFVNSEVGKNIQLPEVVKPGATVDSVTTEIVNNFGLSPECVVCGGTTDSIAAFIASGAN
HHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCC
SPGEAVTSLGSTLVLKLLSHTRVDNSKYGIYSHRFGNLWLVGGASNTGGAVLRHFFTEAE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHH
LESLSRQIDPNIESRLDYYPLLEKGDRFPINDPELLPKLAPRPENSILFLHGLLEGIAKI
HHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHH
ELRGYELLQALSADTLTKVYTAGGGAKNSTFTTIRGRYLGVPTIKAVYTDAAYGSAILAT
HHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCEEECCCCEEHEEECCCCCCHHHHH
HQFISDQTNLTGL
HHHHCCCCCCCCC
>Mature Secondary Structure
MNLYLGIDFGTSGARAVVIDSNFRVKAQTKYIWETEENKLPHVWQKALFNLISNIPQEIR
CEEEEEEEECCCCCEEEEEECCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RKIRAIAIDGTSATVLLCNSDGKPVTETLLYNDSRGVTMMNKLKSIAPSNHSVISVTSSF
HHHEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEHHHH
AKLLWLTENTSTLNQNQTYYFLHQADWLGFLLHGKLGVSDYNNVLKLGYDVNDLCYPDWL
EEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHH
NNFVNSEVGKNIQLPEVVKPGATVDSVTTEIVNNFGLSPECVVCGGTTDSIAAFIASGAN
HHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCC
SPGEAVTSLGSTLVLKLLSHTRVDNSKYGIYSHRFGNLWLVGGASNTGGAVLRHFFTEAE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHH
LESLSRQIDPNIESRLDYYPLLEKGDRFPINDPELLPKLAPRPENSILFLHGLLEGIAKI
HHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHH
ELRGYELLQALSADTLTKVYTAGGGAKNSTFTTIRGRYLGVPTIKAVYTDAAYGSAILAT
HHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCEEECCCCEEHEEECCCCCCHHHHH
HQFISDQTNLTGL
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]