| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474761
Identifier: 113474761
GI number: 113474761
Start: 1518214
End: 1518468
Strand: Reverse
Name: 113474761
Synonym: Tery_0964
Alternate gene names: NA
Gene position: 1518468-1518214 (Counterclockwise)
Preceding gene: 113474767
Following gene: 113474760
Centisome position: 19.59
GC content: 28.24
Gene sequence:
>255_bases ATGATTGAAAGTGTAGATTATTTGGCAGATAAAAATTTTGGAAAATTATTATGTGATTCAGGAGTAAAGATTCTCGAAAT AGCAACAGGAACAAGTACTTTTGTGACTGATTTGATTGAGTATTTGCCTAAGAATAAGTTGGAGTATAAGTATCAGAATA ATATTTTTTGTAATGAGGTAGCAATTTTGCCTTATTACATTGGGAATTTTAATATTGAATATACTTATCAGCAGAAAATA GGGAGTTATGAATAG
Upstream 100 bases:
>100_bases ATTTTTGAAGGTGGTTTATGATAATTTTTATAAGTCTTATCATCCCCTGGGTACTGATAGATTGGGAATTGTTTATAATC GTAAATAAATTGTCAGGTTT
Downstream 100 bases:
>100_bases TTTAATAATATTTGTTTTGTTGATACTTTAGAACATACTTTCTTTGAGGGTAAGCAGTTATATTTATTTGCGATGATAGT GAAAAATACTGAGAGTGTTA
Product: helicase domain-containing protein
Products: NA
Alternate protein names: Helicase; Adenine Specific DNA Methyltransferase; Helicase Domain-Containing Protein; N-6 DNA Methylase
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MIESVDYLADKNFGKLLCDSGVKILEIATGTSTFVTDLIEYLPKNKLEYKYQNNIFCNEVAILPYYIGNFNIEYTYQQKI GSYE
Sequences:
>Translated_84_residues MIESVDYLADKNFGKLLCDSGVKILEIATGTSTFVTDLIEYLPKNKLEYKYQNNIFCNEVAILPYYIGNFNIEYTYQQKI GSYE >Mature_84_residues MIESVDYLADKNFGKLLCDSGVKILEIATGTSTFVTDLIEYLPKNKLEYKYQNNIFCNEVAILPYYIGNFNIEYTYQQKI GSYE
Specific function: Unknown
COG id: COG4889
COG function: function code R; Predicted helicase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9724; Mature: 9724
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESVDYLADKNFGKLLCDSGVKILEIATGTSTFVTDLIEYLPKNKLEYKYQNNIFCNEV CCCCCCHHCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCEEECCE AILPYYIGNFNIEYTYQQKIGSYE EEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MIESVDYLADKNFGKLLCDSGVKILEIATGTSTFVTDLIEYLPKNKLEYKYQNNIFCNEV CCCCCCHHCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCEEECCE AILPYYIGNFNIEYTYQQKIGSYE EEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA