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The map label for this gene is kinB [H]

Identifier: 113474766

GI number: 113474766

Start: 1531676

End: 1533391

Strand: Direct

Name: kinB [H]

Synonym: Tery_0972

Alternate gene names: 113474766

Gene position: 1531676-1533391 (Clockwise)

Preceding gene: 113474765

Following gene: 113474768

Centisome position: 19.76

GC content: 31.29

Gene sequence:

>1716_bases
ATGGACAACTATATATTACCAACTTTAAGTGACATTTTTGCCTCAGAAAAGTCAAATATTGATGTTTATGCAACAAAAAT
GGAACTGTCAAAAGAAAATTACCCTCCTTCCATAACAGAGAAAAATAAAGATTTATATTTAAAGGCTCAAAAGGAATGGT
ATAGTGCTGTTGCTACGATTAATCAACTGCTAGAAAAGTTAGTAAGAACCTCAGATTCTCAAGATTTAAAAAATCAAGAA
ATAACAAAAACTTACAAACAGAAAGAAATTAAAAAAACTACTCCTGTACTAGAAAATTGGGAATCTCAAACTAGATCAAA
ATTCCCTACTTCTAATTCCTTGCTTTCTCATCTCAAATCATATCATGGATTAGTATTATCTGGTATGACTCCTGTGTTAA
CAAATCCTGCTTTAACTAGCAGTTTTTATACTTCAGTATTTACCAGTAAAATATCAGAATCTTTAGAATGGTTATCCATG
TTTAGATGGCAAAGCTTACCTTTGTTACCACCAGCAGATCATATTAATTCTTTACCTGCTGCTATACCAATATTACCTTT
ATCCACTAAAGACCCGATAACAAATGAACAGTTTTGTTTAGTTTTAACTGCTGAATTTAGTTTGATTATGGTCTTAGGAA
AAAACCAAGATAATACACCAGCTTTTCTATTTTCTTTTGAGCCAGAAATAGTAAAAAAAGCATGGCTTGTCTTACAGCAA
CGAAGAGTATTACCAAAATATTTTGATTTCAATAATCTTGATAAGTATCAAAGTTTTATTCACCAATATTCTCAAAAGTT
AGCTATTTTAGATGATATTTTTGAGCAGTTTTTACCTGTAGCTCCTGACTACAAAATAGTGATGGAGTTTAGCCGCTTAT
TATTATCTAATTTACCAATTACAGATACTAAAAATGAAACATTAGAAGTCAATATTTATAACAAAAATGGAGAAAAGCAA
GAAGCTACTACATCACTAAAATCTACTATTGAAAATCTCAAGTCTCCTGATGTGGAATTGTTACAGGCGATCGCTCACGA
AGTTAAAACTCCTTTAGCAACAATTCAGACTTTAACCCGCCTTTTATTAAAACGTCTTAATCTAAATCAGGAACTAATGA
GAAAACATTTACAAATGATTGATACTGAATGTACTTCTCAAATAGAACGCTTTAACCTGATTTTTAGAGCGGCAGAATTA
GAAAATCAGCAACCTTTAAAAGAACAACATCCATATTTACAATTAACAAGTATTCCTCTGGCTCAAGTATTTAAAAATAG
CATTCCCCGTTGGCAACAAAAAGCAACTCAAAGAAATCATACTTTGAAAGTTATTTTACCTCCAAAAATGCCAAGTATCA
TTAGCGATCCTACTATGCTTGACCAAGTATTAGGAAATTTGATTGAAAATTTCTCCCGTAATTTAGCCCCTGGCAGTCTT
ATAAAGGTGGAAGTAATGTTAGCTGGTAGTCAACTAAAATTACAGCTTAAGTCTGATTCTGATATTGGTGAAAAAAGTTC
TTCACCTTTTACTAATTACACAAAAACACCTTTGAAATCTATTGGTCCTTTATTAATGTTTCAACCAGAAACAGGTAGTC
TTAGTTTAAATTTAAAAGTGACTAAAAATTTGTTTCAAGCAATAGGAGGAAAATTAGTGGTTCGACAAAGACCAACTAAA
GGGGAAGTAATGACTATTTTCTTGCCAGTTCAATAA

Upstream 100 bases:

>100_bases
TTTAATTTTTCTTATCCCATCTCAAAAAGATTTTCCGACTGATCGCTGACTGTTTTTTTTATAGATTAAAATTATTTATT
CATTTATTTGCACAAAAAAA

Downstream 100 bases:

>100_bases
TTTATTAAGGTAGGATGATTTTGGAAAAAAAAATACTAATACTATGTTATTTTTAACAAGAAGTTTTTATTTGATTTCAT
GAATTAAGGTACAATTATTA

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MDNYILPTLSDIFASEKSNIDVYATKMELSKENYPPSITEKNKDLYLKAQKEWYSAVATINQLLEKLVRTSDSQDLKNQE
ITKTYKQKEIKKTTPVLENWESQTRSKFPTSNSLLSHLKSYHGLVLSGMTPVLTNPALTSSFYTSVFTSKISESLEWLSM
FRWQSLPLLPPADHINSLPAAIPILPLSTKDPITNEQFCLVLTAEFSLIMVLGKNQDNTPAFLFSFEPEIVKKAWLVLQQ
RRVLPKYFDFNNLDKYQSFIHQYSQKLAILDDIFEQFLPVAPDYKIVMEFSRLLLSNLPITDTKNETLEVNIYNKNGEKQ
EATTSLKSTIENLKSPDVELLQAIAHEVKTPLATIQTLTRLLLKRLNLNQELMRKHLQMIDTECTSQIERFNLIFRAAEL
ENQQPLKEQHPYLQLTSIPLAQVFKNSIPRWQQKATQRNHTLKVILPPKMPSIISDPTMLDQVLGNLIENFSRNLAPGSL
IKVEVMLAGSQLKLQLKSDSDIGEKSSSPFTNYTKTPLKSIGPLLMFQPETGSLSLNLKVTKNLFQAIGGKLVVRQRPTK
GEVMTIFLPVQ

Sequences:

>Translated_571_residues
MDNYILPTLSDIFASEKSNIDVYATKMELSKENYPPSITEKNKDLYLKAQKEWYSAVATINQLLEKLVRTSDSQDLKNQE
ITKTYKQKEIKKTTPVLENWESQTRSKFPTSNSLLSHLKSYHGLVLSGMTPVLTNPALTSSFYTSVFTSKISESLEWLSM
FRWQSLPLLPPADHINSLPAAIPILPLSTKDPITNEQFCLVLTAEFSLIMVLGKNQDNTPAFLFSFEPEIVKKAWLVLQQ
RRVLPKYFDFNNLDKYQSFIHQYSQKLAILDDIFEQFLPVAPDYKIVMEFSRLLLSNLPITDTKNETLEVNIYNKNGEKQ
EATTSLKSTIENLKSPDVELLQAIAHEVKTPLATIQTLTRLLLKRLNLNQELMRKHLQMIDTECTSQIERFNLIFRAAEL
ENQQPLKEQHPYLQLTSIPLAQVFKNSIPRWQQKATQRNHTLKVILPPKMPSIISDPTMLDQVLGNLIENFSRNLAPGSL
IKVEVMLAGSQLKLQLKSDSDIGEKSSSPFTNYTKTPLKSIGPLLMFQPETGSLSLNLKVTKNLFQAIGGKLVVRQRPTK
GEVMTIFLPVQ
>Mature_571_residues
MDNYILPTLSDIFASEKSNIDVYATKMELSKENYPPSITEKNKDLYLKAQKEWYSAVATINQLLEKLVRTSDSQDLKNQE
ITKTYKQKEIKKTTPVLENWESQTRSKFPTSNSLLSHLKSYHGLVLSGMTPVLTNPALTSSFYTSVFTSKISESLEWLSM
FRWQSLPLLPPADHINSLPAAIPILPLSTKDPITNEQFCLVLTAEFSLIMVLGKNQDNTPAFLFSFEPEIVKKAWLVLQQ
RRVLPKYFDFNNLDKYQSFIHQYSQKLAILDDIFEQFLPVAPDYKIVMEFSRLLLSNLPITDTKNETLEVNIYNKNGEKQ
EATTSLKSTIENLKSPDVELLQAIAHEVKTPLATIQTLTRLLLKRLNLNQELMRKHLQMIDTECTSQIERFNLIFRAAEL
ENQQPLKEQHPYLQLTSIPLAQVFKNSIPRWQQKATQRNHTLKVILPPKMPSIISDPTMLDQVLGNLIENFSRNLAPGSL
IKVEVMLAGSQLKLQLKSDSDIGEKSSSPFTNYTKTPLKSIGPLLMFQPETGSLSLNLKVTKNLFQAIGGKLVVRQRPTK
GEVMTIFLPVQ

Specific function: Member of the two-component regulatory system AlgB/KinB involved in regulation of alginate biosynthesis genes. KinB functions as a membrane-associated protein kinase that phosphorylates AlgB, probably in response to environmental signals [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013656
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF08448 PAS_4 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 65062; Mature: 65062

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNYILPTLSDIFASEKSNIDVYATKMELSKENYPPSITEKNKDLYLKAQKEWYSAVATI
CCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH
NQLLEKLVRTSDSQDLKNQEITKTYKQKEIKKTTPVLENWESQTRSKFPTSNSLLSHLKS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHH
YHGLVLSGMTPVLTNPALTSSFYTSVFTSKISESLEWLSMFRWQSLPLLPPADHINSLPA
HCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
AIPILPLSTKDPITNEQFCLVLTAEFSLIMVLGKNQDNTPAFLFSFEPEIVKKAWLVLQQ
CCEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHH
RRVLPKYFDFNNLDKYQSFIHQYSQKLAILDDIFEQFLPVAPDYKIVMEFSRLLLSNLPI
HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
TDTKNETLEVNIYNKNGEKQEATTSLKSTIENLKSPDVELLQAIAHEVKTPLATIQTLTR
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHH
LLLKRLNLNQELMRKHLQMIDTECTSQIERFNLIFRAAELENQQPLKEQHPYLQLTSIPL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCH
AQVFKNSIPRWQQKATQRNHTLKVILPPKMPSIISDPTMLDQVLGNLIENFSRNLAPGSL
HHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCE
IKVEVMLAGSQLKLQLKSDSDIGEKSSSPFTNYTKTPLKSIGPLLMFQPETGSLSLNLKV
EEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCEEEEEHH
TKNLFQAIGGKLVVRQRPTKGEVMTIFLPVQ
HHHHHHHCCCEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MDNYILPTLSDIFASEKSNIDVYATKMELSKENYPPSITEKNKDLYLKAQKEWYSAVATI
CCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH
NQLLEKLVRTSDSQDLKNQEITKTYKQKEIKKTTPVLENWESQTRSKFPTSNSLLSHLKS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHH
YHGLVLSGMTPVLTNPALTSSFYTSVFTSKISESLEWLSMFRWQSLPLLPPADHINSLPA
HCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
AIPILPLSTKDPITNEQFCLVLTAEFSLIMVLGKNQDNTPAFLFSFEPEIVKKAWLVLQQ
CCEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHH
RRVLPKYFDFNNLDKYQSFIHQYSQKLAILDDIFEQFLPVAPDYKIVMEFSRLLLSNLPI
HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
TDTKNETLEVNIYNKNGEKQEATTSLKSTIENLKSPDVELLQAIAHEVKTPLATIQTLTR
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHH
LLLKRLNLNQELMRKHLQMIDTECTSQIERFNLIFRAAELENQQPLKEQHPYLQLTSIPL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCH
AQVFKNSIPRWQQKATQRNHTLKVILPPKMPSIISDPTMLDQVLGNLIENFSRNLAPGSL
HHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCE
IKVEVMLAGSQLKLQLKSDSDIGEKSSSPFTNYTKTPLKSIGPLLMFQPETGSLSLNLKV
EEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCEEEEEHH
TKNLFQAIGGKLVVRQRPTKGEVMTIFLPVQ
HHHHHHHCCCEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9218420 [H]