| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is glmM [H]
Identifier: 113474765
GI number: 113474765
Start: 1527065
End: 1528504
Strand: Direct
Name: glmM [H]
Synonym: Tery_0970
Alternate gene names: 113474765
Gene position: 1527065-1528504 (Clockwise)
Preceding gene: 113474764
Following gene: 113474766
Centisome position: 19.7
GC content: 37.29
Gene sequence:
>1440_bases ATGGCTAAACCAATTAAATTTGGAACAGATGGCTGGCGCGGTGTCATAGCTGATGATTTTACATTTGAACGAGTTACTCT AGTAGCTCCTATTGCAGCAAAAATTTTAGATAAAAATTATGCTGATTCTACTAATAATAGTAAAACAATAATTGTTGGCC ATGATCGCAGGTTTATGGCTGAAGAATTTGCTCAAGTAGCTGCAGAAGCTATTCAAAATGCAGGATTTGATGTTTTGTTA ACGGATACTTATGCTCCTACTCCTGCTTTTAGTTTGGCAGCATTTCAAAAAAAAGCTCTTGGGGCTATTGTTATGACTGC TAGTCATAACCCAGGGAAATATTTAGGGCTAAAAGTAAAGGGTGCTTTTGGTGGGTCGGTACCTCCAGAAATAACTAAAC AAATAGAAGATTTATTAACAGTTGAGACTGAAAAAAATCTAGTTCAAGAAGGTAAAATAGAAACTTTTAATCCCTGGCAA AATTACTGTGAAACTCTCAAAAAAATGGTAGAGATTCACAGTATTAAGTCGGCGATTAATGAAGGAAAATTAAAAGTTTT TGCAGATGTAATGCACGGAGCTGCTGCTGGAGGTTTACAACAAATATTGGGAGTAGAAATTGAAGAGGTTAATGGTAATA GGGATCCTTTCTTTGATGGTGGAGCACCTGAACCTTTGCCTCGTTATTTAAGTAAACTTTTTAAGAGAATTAAAAGTTAT CGAGCAGCAAATGAAGGAAGTTTAGCAATTGGGTTAGTGTTTGATGGAGATAGCGATCGCATTGCTGCTGTTGATGGTGA GGGTAATTTTCTCAGCTCTCAAATTTTAATTCCCATTCTCATTGAACATTTAACAACTACACATGGGTGTAGTGGAGAAG TTGTAAAAACTATTAGTGGTTCTGATTTATTCCCGAAAGTAGCAGAGTTATACAAGATGCCAGTGTTTGAAACTCCTATT GGCTATAAATATATTGCTGATAGGATGTTGTCAACTCAGGTGCTTGTGGGTGGTGAAGAGTCTGGGGGTATTGGTTATGG TACTCATATTCCAGAAAGGGATGCTTTGTTGTCGGCGCTTTATTTGTTGGAAGCAGTGGTCATGTCTAGTGAAGATTTGA CTACTATTTATCGGCATTTGCAAGAAAAAACGGGTTTTAGTTCTGTTTATGACCGGATAGATTTGCCTTTGCTTAATATG GGAGTACGATCACGCCTGTTGGAAGAGTTAATAAATAATCCTGTGACTGAAGTTGCTGGCCAAAAAGTGCTTGATTGTAT AACTATAGATGGGTATAAGTTTCGGTTAGCTGATGGTCGTTGGTTGTTAATTCGGTTTAGTGGTACTGAACCTGTTTTGC GACTTTATTGTGAAGCTACGGATATGCAGAAGGTTAAACAAACTTTGGAATGGGCAAAAAATTGGGCTAATAGTATTTAG
Upstream 100 bases:
>100_bases CCTTATCTCAAAAAATTACAAGATTTTGGATAGGGTAAAAATAAGATTGCTATATAACAGGACTTAGACAAAAAAATATA TATATTAAGAGATTTCTGAT
Downstream 100 bases:
>100_bases GAGTTTGATGAATTATATTATGTCTGGTCTCAAGAATTCAGGAGTCAGAAGTCAGGAGGAGTAAAAATAATTTTTTCATT TTTGTTTATAGCAATCCTAA
Product: phosphoglucomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAKPIKFGTDGWRGVIADDFTFERVTLVAPIAAKILDKNYADSTNNSKTIIVGHDRRFMAEEFAQVAAEAIQNAGFDVLL TDTYAPTPAFSLAAFQKKALGAIVMTASHNPGKYLGLKVKGAFGGSVPPEITKQIEDLLTVETEKNLVQEGKIETFNPWQ NYCETLKKMVEIHSIKSAINEGKLKVFADVMHGAAAGGLQQILGVEIEEVNGNRDPFFDGGAPEPLPRYLSKLFKRIKSY RAANEGSLAIGLVFDGDSDRIAAVDGEGNFLSSQILIPILIEHLTTTHGCSGEVVKTISGSDLFPKVAELYKMPVFETPI GYKYIADRMLSTQVLVGGEESGGIGYGTHIPERDALLSALYLLEAVVMSSEDLTTIYRHLQEKTGFSSVYDRIDLPLLNM GVRSRLLEELINNPVTEVAGQKVLDCITIDGYKFRLADGRWLLIRFSGTEPVLRLYCEATDMQKVKQTLEWAKNWANSI
Sequences:
>Translated_479_residues MAKPIKFGTDGWRGVIADDFTFERVTLVAPIAAKILDKNYADSTNNSKTIIVGHDRRFMAEEFAQVAAEAIQNAGFDVLL TDTYAPTPAFSLAAFQKKALGAIVMTASHNPGKYLGLKVKGAFGGSVPPEITKQIEDLLTVETEKNLVQEGKIETFNPWQ NYCETLKKMVEIHSIKSAINEGKLKVFADVMHGAAAGGLQQILGVEIEEVNGNRDPFFDGGAPEPLPRYLSKLFKRIKSY RAANEGSLAIGLVFDGDSDRIAAVDGEGNFLSSQILIPILIEHLTTTHGCSGEVVKTISGSDLFPKVAELYKMPVFETPI GYKYIADRMLSTQVLVGGEESGGIGYGTHIPERDALLSALYLLEAVVMSSEDLTTIYRHLQEKTGFSSVYDRIDLPLLNM GVRSRLLEELINNPVTEVAGQKVLDCITIDGYKFRLADGRWLLIRFSGTEPVLRLYCEATDMQKVKQTLEWAKNWANSI >Mature_478_residues AKPIKFGTDGWRGVIADDFTFERVTLVAPIAAKILDKNYADSTNNSKTIIVGHDRRFMAEEFAQVAAEAIQNAGFDVLLT DTYAPTPAFSLAAFQKKALGAIVMTASHNPGKYLGLKVKGAFGGSVPPEITKQIEDLLTVETEKNLVQEGKIETFNPWQN YCETLKKMVEIHSIKSAINEGKLKVFADVMHGAAAGGLQQILGVEIEEVNGNRDPFFDGGAPEPLPRYLSKLFKRIKSYR AANEGSLAIGLVFDGDSDRIAAVDGEGNFLSSQILIPILIEHLTTTHGCSGEVVKTISGSDLFPKVAELYKMPVFETPIG YKYIADRMLSTQVLVGGEESGGIGYGTHIPERDALLSALYLLEAVVMSSEDLTTIYRHLQEKTGFSSVYDRIDLPLLNMG VRSRLLEELINNPVTEVAGQKVLDCITIDGYKFRLADGRWLLIRFSGTEPVLRLYCEATDMQKVKQTLEWAKNWANSI
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=474, Percent_Identity=24.8945147679325, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI21361621, Length=483, Percent_Identity=25.0517598343685, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI290463102, Length=483, Percent_Identity=24.223602484472, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI290463104, Length=340, Percent_Identity=23.8235294117647, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1788361, Length=427, Percent_Identity=25.5269320843091, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789566, Length=492, Percent_Identity=24.7967479674797, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17535441, Length=434, Percent_Identity=25.8064516129032, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323752, Length=494, Percent_Identity=23.0769230769231, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322722, Length=465, Percent_Identity=24.7311827956989, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI17864244, Length=525, Percent_Identity=24.952380952381, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI20129809, Length=544, Percent_Identity=24.2647058823529, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651977, Length=421, Percent_Identity=24.2280285035629, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52665; Mature: 52534
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPIKFGTDGWRGVIADDFTFERVTLVAPIAAKILDKNYADSTNNSKTIIVGHDRRFMA CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHH EEFAQVAAEAIQNAGFDVLLTDTYAPTPAFSLAAFQKKALGAIVMTASHNPGKYLGLKVK HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEEE GAFGGSVPPEITKQIEDLLTVETEKNLVQEGKIETFNPWQNYCETLKKMVEIHSIKSAIN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC EGKLKVFADVMHGAAAGGLQQILGVEIEEVNGNRDPFFDGGAPEPLPRYLSKLFKRIKSY CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RAANEGSLAIGLVFDGDSDRIAAVDGEGNFLSSQILIPILIEHLTTTHGCSGEVVKTISG CCCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCC SDLFPKVAELYKMPVFETPIGYKYIADRMLSTQVLVGGEESGGIGYGTHIPERDALLSAL CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHH YLLEAVVMSSEDLTTIYRHLQEKTGFSSVYDRIDLPLLNMGVRSRLLEELINNPVTEVAG HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH QKVLDCITIDGYKFRLADGRWLLIRFSGTEPVLRLYCEATDMQKVKQTLEWAKNWANSI HHHHHEEEECCEEEEEECCEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKPIKFGTDGWRGVIADDFTFERVTLVAPIAAKILDKNYADSTNNSKTIIVGHDRRFMA CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHH EEFAQVAAEAIQNAGFDVLLTDTYAPTPAFSLAAFQKKALGAIVMTASHNPGKYLGLKVK HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEEE GAFGGSVPPEITKQIEDLLTVETEKNLVQEGKIETFNPWQNYCETLKKMVEIHSIKSAIN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC EGKLKVFADVMHGAAAGGLQQILGVEIEEVNGNRDPFFDGGAPEPLPRYLSKLFKRIKSY CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RAANEGSLAIGLVFDGDSDRIAAVDGEGNFLSSQILIPILIEHLTTTHGCSGEVVKTISG CCCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCC SDLFPKVAELYKMPVFETPIGYKYIADRMLSTQVLVGGEESGGIGYGTHIPERDALLSAL CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHH YLLEAVVMSSEDLTTIYRHLQEKTGFSSVYDRIDLPLLNMGVRSRLLEELINNPVTEVAG HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH QKVLDCITIDGYKFRLADGRWLLIRFSGTEPVLRLYCEATDMQKVKQTLEWAKNWANSI HHHHHEEEECCEEEEEECCEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA