| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is folE [H]
Identifier: 113474764
GI number: 113474764
Start: 1525249
End: 1525980
Strand: Direct
Name: folE [H]
Synonym: Tery_0969
Alternate gene names: 113474764
Gene position: 1525249-1525980 (Clockwise)
Preceding gene: 113474763
Following gene: 113474765
Centisome position: 19.68
GC content: 39.07
Gene sequence:
>732_bases ATGACTCAATCTTCTTCCAACCGTTCCAATTCTAAGAACACACTCAACATGAATGGAGTTAAAACTTCTGATGCAAATAT GACGAGTCAAATTTCCTATAGACCTGAGCGTATCTCCTCATCCAATGGTCAATCAATTAAGCAAAAGCTTTCTACTGAAG ACAGCAATGAGAGAATGAAGGAGGCAGTGCGGACAATCTTACTCTCAGTAGAAGAAAATCCTGAACGAGAAGGATTACTC AATACTCCCAAGCGGTTTGCAGAAGCAATGCAGTTTCTGACTAGTGGCTACAGTCAATCCCTCGAAGAAATTGTGAATGG TGCGATTTTTGACGAAGGTCATAATGAAATGGTTCTAGTTAGAGATATCAATTTTTTTAGTCTTTGTGAACATCATATGT TACCCTTCATGGGAAAAGCTCATATCGCTTACATTCCTAATCAAAAAGTAGTAGGACTCAGTAAGCTAGCTAGAGTTGTC GACATGTACTCTCGTAGATTGCAAGTCCAGGAGCGACTAAATCGTCAAATTGCTGAGGCAATTCAAACAATTTTGGAACC AAAGGGCGTAGCAGTTGTAATTGAGGCTACTCATATATCTATGGTAATGCGAGGGGTTCAAAAACCTGGTTCTTGGACTG TTACTAGTGCCATGGTTGGTCTTTTTAAAGAAGATCAGAAAACAAGAGAAGAATATCTAAACTTAATTCGCCATCAACCT ACCTTCTTTTAA
Upstream 100 bases:
>100_bases TTAGTATTAATAAACAAAAAATTATAATCTAAGCTAAAAAATCTAGCATAAGTTAGGTCAAAATACAATTTGCTTTTTTT AAATTTGATCCCAATCTATT
Downstream 100 bases:
>100_bases CTGCCCCGAGAAGTCCTGCGCTCTTTTGAAGGAGAGCGTCGGGATAAAAGTCGGGCGTTATGTGCGTTTTTGATCTTAAT TTTTATGATGGCTATTAACG
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTQSSSNRSNSKNTLNMNGVKTSDANMTSQISYRPERISSSNGQSIKQKLSTEDSNERMKEAVRTILLSVEENPEREGLL NTPKRFAEAMQFLTSGYSQSLEEIVNGAIFDEGHNEMVLVRDINFFSLCEHHMLPFMGKAHIAYIPNQKVVGLSKLARVV DMYSRRLQVQERLNRQIAEAIQTILEPKGVAVVIEATHISMVMRGVQKPGSWTVTSAMVGLFKEDQKTREEYLNLIRHQP TFF
Sequences:
>Translated_243_residues MTQSSSNRSNSKNTLNMNGVKTSDANMTSQISYRPERISSSNGQSIKQKLSTEDSNERMKEAVRTILLSVEENPEREGLL NTPKRFAEAMQFLTSGYSQSLEEIVNGAIFDEGHNEMVLVRDINFFSLCEHHMLPFMGKAHIAYIPNQKVVGLSKLARVV DMYSRRLQVQERLNRQIAEAIQTILEPKGVAVVIEATHISMVMRGVQKPGSWTVTSAMVGLFKEDQKTREEYLNLIRHQP TFF >Mature_242_residues TQSSSNRSNSKNTLNMNGVKTSDANMTSQISYRPERISSSNGQSIKQKLSTEDSNERMKEAVRTILLSVEENPEREGLLN TPKRFAEAMQFLTSGYSQSLEEIVNGAIFDEGHNEMVLVRDINFFSLCEHHMLPFMGKAHIAYIPNQKVVGLSKLARVVD MYSRRLQVQERLNRQIAEAIQTILEPKGVAVVIEATHISMVMRGVQKPGSWTVTSAMVGLFKEDQKTREEYLNLIRHQPT FF
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=209, Percent_Identity=57.4162679425837, Blast_Score=251, Evalue=4e-67, Organism=Homo sapiens, GI4503949, Length=209, Percent_Identity=57.4162679425837, Blast_Score=251, Evalue=4e-67, Organism=Homo sapiens, GI66932970, Length=178, Percent_Identity=52.247191011236, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI66932972, Length=169, Percent_Identity=54.4378698224852, Blast_Score=195, Evalue=3e-50, Organism=Escherichia coli, GI1788476, Length=125, Percent_Identity=48.8, Blast_Score=119, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560486, Length=187, Percent_Identity=59.3582887700535, Blast_Score=242, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=57.4585635359116, Blast_Score=227, Evalue=1e-60, Organism=Drosophila melanogaster, GI24656782, Length=178, Percent_Identity=58.4269662921348, Blast_Score=223, Evalue=8e-59, Organism=Drosophila melanogaster, GI24656791, Length=178, Percent_Identity=58.4269662921348, Blast_Score=223, Evalue=9e-59, Organism=Drosophila melanogaster, GI24656796, Length=178, Percent_Identity=58.4269662921348, Blast_Score=223, Evalue=1e-58,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 27555; Mature: 27424
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSSSNRSNSKNTLNMNGVKTSDANMTSQISYRPERISSSNGQSIKQKLSTEDSNERMK CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHCCCCHHHHHH EAVRTILLSVEENPEREGLLNTPKRFAEAMQFLTSGYSQSLEEIVNGAIFDEGHNEMVLV HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEE RDINFFSLCEHHMLPFMGKAHIAYIPNQKVVGLSKLARVVDMYSRRLQVQERLNRQIAEA ECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQTILEPKGVAVVIEATHISMVMRGVQKPGSWTVTSAMVGLFKEDQKTREEYLNLIRHQP HHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFF CCC >Mature Secondary Structure TQSSSNRSNSKNTLNMNGVKTSDANMTSQISYRPERISSSNGQSIKQKLSTEDSNERMK CCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHCCCCHHHHHH EAVRTILLSVEENPEREGLLNTPKRFAEAMQFLTSGYSQSLEEIVNGAIFDEGHNEMVLV HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEE RDINFFSLCEHHMLPFMGKAHIAYIPNQKVVGLSKLARVVDMYSRRLQVQERLNRQIAEA ECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQTILEPKGVAVVIEATHISMVMRGVQKPGSWTVTSAMVGLFKEDQKTREEYLNLIRHQP HHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA