| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is glpX [C]
Identifier: 113474751
GI number: 113474751
Start: 1494752
End: 1495789
Strand: Direct
Name: glpX [C]
Synonym: Tery_0948
Alternate gene names: 113474751
Gene position: 1494752-1495789 (Clockwise)
Preceding gene: 113474748
Following gene: 113474752
Centisome position: 19.29
GC content: 41.43
Gene sequence:
>1038_bases ATGGATAATGTAATCGGTTTAGAAATTATCGAAGTAGTAGAACAAGCAGCGATCGCCTCTGCTCGTTGGATGGGAAAAGG GGAGAAAAATACTGCAGACGAAGTAGCTGTAGAAGCTATGCGCGAACGTATGAACAAAATTCACATGAGAGGCCGCATTG TAATTGGAGAAGGGGAGCGAGATGAAGCACCCATGCTCTACATTGGGGAAGAAGTAGGAATTTGTACTCAGCCTGATGCG AAAAAAATGTGTGAGGTAGAACAGCTAATCGAGATTGACATAGCAGTGGACCCTTGTGAAGGTACAAACCTAGTTGCTTA TGGTCAAAATGGTTCTATGGCAGTATTAGCTATTTCTGAGAAAGGTGGTTTGTTGGCAGCACCAGATGTCTATATGAAAA AACTAGCGGCACCAGCAGTAGCTAAAAATCATGTAGATATTAATAAGTCGGCTACCGAAAACCTCAAAATTATTTCAGAA TGCATGGACCGTGCTGTTGAAGAATTGGTAGTTGTAGTTATGGATCGTCCACGTCACAAACAGTTAATTAGTGAAATTCG TCAAGCTGGTGCTAGAGTTCGTCTAATTAGTGATGGTGACGTTTCTGCTGCAATTTCCTGTGCATTTGCAGGTACAAATA TTCATGCTTTGATGGGTATTGGTGCAGCCCCAGAGGGAGTAATTTCTGCAGCAGCTATGCGTGCTTTAGGAGGCCATTTC CAAGGACAACTGATTTATGACCCAGCTATTGTCAAAACTGGTTTAATTGGAGAAAGCAAAGAAGATAATATGAAGCGACT CAAAGATATGGGTATTGAAGATCCAGACAAAGTTTATAATGCTGAAGAATTAGCTTCTGGAGAAACAGTCCTATTTGCAG CTTGTGGTATTACTCCTGGTACTCTGATGGAAGGAGTACGTTTCTTCCCCAATGGCGCTCGTACCCAAAGTTTAGTTATT TCTTCTCAGTCAAAAACTGCTCGTTTTGTAGATACTGTTCATATGTTTGGAGAAACAAAAACACTGCAGCTGAAATAG
Upstream 100 bases:
>100_bases CCCCATAAAGTCCTAACCTGAACCCCGCCTCTGATAGACTTTAACACTGGGAGAGCAAAATCAAAAACTTTTCCTGTTTC ATTGAGAGAATAAAAAAATT
Downstream 100 bases:
>100_bases AAATAGTATTAGGTAAATTAGAGCTAGATATAGTTAATAAAAATTTGCCTAAAATTCTCAAATTTACTCATCGGCTAAAA ATGCCACATTAAGAGAATGC
Product: fructose 1,6-bisphosphatase II
Products: NA
Alternate protein names: FBPase class 2/SBPase
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MDNVIGLEIIEVVEQAAIASARWMGKGEKNTADEVAVEAMRERMNKIHMRGRIVIGEGERDEAPMLYIGEEVGICTQPDA KKMCEVEQLIEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLLAAPDVYMKKLAAPAVAKNHVDINKSATENLKIISE CMDRAVEELVVVVMDRPRHKQLISEIRQAGARVRLISDGDVSAAISCAFAGTNIHALMGIGAAPEGVISAAAMRALGGHF QGQLIYDPAIVKTGLIGESKEDNMKRLKDMGIEDPDKVYNAEELASGETVLFAACGITPGTLMEGVRFFPNGARTQSLVI SSQSKTARFVDTVHMFGETKTLQLK
Sequences:
>Translated_345_residues MDNVIGLEIIEVVEQAAIASARWMGKGEKNTADEVAVEAMRERMNKIHMRGRIVIGEGERDEAPMLYIGEEVGICTQPDA KKMCEVEQLIEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLLAAPDVYMKKLAAPAVAKNHVDINKSATENLKIISE CMDRAVEELVVVVMDRPRHKQLISEIRQAGARVRLISDGDVSAAISCAFAGTNIHALMGIGAAPEGVISAAAMRALGGHF QGQLIYDPAIVKTGLIGESKEDNMKRLKDMGIEDPDKVYNAEELASGETVLFAACGITPGTLMEGVRFFPNGARTQSLVI SSQSKTARFVDTVHMFGETKTLQLK >Mature_345_residues MDNVIGLEIIEVVEQAAIASARWMGKGEKNTADEVAVEAMRERMNKIHMRGRIVIGEGERDEAPMLYIGEEVGICTQPDA KKMCEVEQLIEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLLAAPDVYMKKLAAPAVAKNHVDINKSATENLKIISE CMDRAVEELVVVVMDRPRHKQLISEIRQAGARVRLISDGDVSAAISCAFAGTNIHALMGIGAAPEGVISAAAMRALGGHF QGQLIYDPAIVKTGLIGESKEDNMKRLKDMGIEDPDKVYNAEELASGETVLFAACGITPGTLMEGVRFFPNGARTQSLVI SSQSKTARFVDTVHMFGETKTLQLK
Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate (Fru 1,6-P2) and sedoheptulose 1,7-bisphosphate (Sed 1,7-P2) to fructose 6-phosphate and sedoheptulose 7-phosphate, respectively
COG id: COG1494
COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 2 family
Homologues:
Organism=Escherichia coli, GI1790360, Length=338, Percent_Identity=41.7159763313609, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1789298, Length=333, Percent_Identity=41.1411411411411, Blast_Score=243, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FBSB_TRIEI (Q117I5)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720812.1 - ProteinModelPortal: Q117I5 - SMR: Q117I5 - STRING: Q117I5 - GeneID: 4245687 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0948 - NMPDR: fig|203124.1.peg.4139 - eggNOG: COG1494 - HOGENOM: HBG284837 - OMA: GTVRFIE - PhylomeDB: Q117I5 - ProtClustDB: PRK09479 - BioCyc: TERY203124:TERY_0948-MONOMER - InterPro: IPR004464 - PIRSF: PIRSF004532 - TIGRFAMs: TIGR00330
Pfam domain/function: PF03320 FBPase_glpX
EC number: =3.1.3.11; =3.1.3.37
Molecular weight: Translated: 37113; Mature: 37113
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: BINDING 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNVIGLEIIEVVEQAAIASARWMGKGEKNTADEVAVEAMRERMNKIHMRGRIVIGEGER CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC DEAPMLYIGEEVGICTQPDAKKMCEVEQLIEIDIAVDPCEGTNLVAYGQNGSMAVLAISE CCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCEEEEEEEC KGGLLAAPDVYMKKLAAPAVAKNHVDINKSATENLKIISECMDRAVEELVVVVMDRPRHK CCCEEECCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHCCCCCHHH QLISEIRQAGARVRLISDGDVSAAISCAFAGTNIHALMGIGAAPEGVISAAAMRALGGHF HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCC QGQLIYDPAIVKTGLIGESKEDNMKRLKDMGIEDPDKVYNAEELASGETVLFAACGITPG CCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHCCCCEEEEEECCCCHH TLMEGVRFFPNGARTQSLVISSQSKTARFVDTVHMFGETKTLQLK HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MDNVIGLEIIEVVEQAAIASARWMGKGEKNTADEVAVEAMRERMNKIHMRGRIVIGEGER CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC DEAPMLYIGEEVGICTQPDAKKMCEVEQLIEIDIAVDPCEGTNLVAYGQNGSMAVLAISE CCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCEEEEEEEC KGGLLAAPDVYMKKLAAPAVAKNHVDINKSATENLKIISECMDRAVEELVVVVMDRPRHK CCCEEECCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHCCCCCHHH QLISEIRQAGARVRLISDGDVSAAISCAFAGTNIHALMGIGAAPEGVISAAAMRALGGHF HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCC QGQLIYDPAIVKTGLIGESKEDNMKRLKDMGIEDPDKVYNAEELASGETVLFAACGITPG CCEEEECCHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHCCCCEEEEEECCCCHH TLMEGVRFFPNGARTQSLVISSQSKTARFVDTVHMFGETKTLQLK HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA