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The map label for this gene is infC [H]

Identifier: 113474737

GI number: 113474737

Start: 1466317

End: 1466853

Strand: Reverse

Name: infC [H]

Synonym: Tery_0930

Alternate gene names: 113474737

Gene position: 1466853-1466317 (Counterclockwise)

Preceding gene: 113474739

Following gene: 113474736

Centisome position: 18.93

GC content: 39.29

Gene sequence:

>537_bases
ATGCCAATCGAAAAAAAAAATAATCGTAATCTCCCTCAAGTTAACGAAAAGATTAGAGTTCCCAAAGTTAGGGCTGTTGA
TGCAGATGGCCAACAATTAGGAATTGTAGAAACAAGAGAAGCTTTACGGATGGCCCAGGAAAAAGGTCTCGATCTGGTTA
TGGTCAGTGATAAAGCTGATCCACCAGTTTGTAGAATAATTGATTACGGTAAATATCTGTTTGAACAGAAAAAGAAAGTT
CAGGATGCCAAACGTAAGCAGCATAATGCCGAAGTTAAGGAAGTGAAGATGCGCTATAAAATTGAGGAGCATGACTATAA
TGTCCGCTTATCTCATGCAAAGCGTTTTCTCGAGTCTGGTGATAAAGTGAAAGCCACTATTATGTTCCGAGGCCGGGAAA
TACAACACAGTAACCTTGCAGAAGAATTATTGCAACGGATGGCAACAGATTTAAAAGATTTAGCGGAGATTCAACAAGCT
CCCAAAAAGGAGGGACGTAGTATGATGATGTTGTTATCTCCTAAAAAGTCAAGTTGA

Upstream 100 bases:

>100_bases
TTGCATAAAAATATTTGATTATGATAATATATTATTGATAAGTTATATCACATAAAGTTTAACCAATATCCTTGCCAACA
TCGTTTTAAAATTCCAATTA

Downstream 100 bases:

>100_bases
ATACTTTAAGCATTTATATAGAATTTACAGCAGGTACCAATTATATTAATTACGGAAAAATTGGGTTTAAAGCCTTGCCC
TTCTAGGACAACTTCTAATT

Product: translation initiation factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPIEKKNNRNLPQVNEKIRVPKVRAVDADGQQLGIVETREALRMAQEKGLDLVMVSDKADPPVCRIIDYGKYLFEQKKKV
QDAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESGDKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQA
PKKEGRSMMMLLSPKKSS

Sequences:

>Translated_178_residues
MPIEKKNNRNLPQVNEKIRVPKVRAVDADGQQLGIVETREALRMAQEKGLDLVMVSDKADPPVCRIIDYGKYLFEQKKKV
QDAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESGDKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQA
PKKEGRSMMMLLSPKKSS
>Mature_177_residues
PIEKKNNRNLPQVNEKIRVPKVRAVDADGQQLGIVETREALRMAQEKGLDLVMVSDKADPPVCRIIDYGKYLFEQKKKVQ
DAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESGDKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQAP
KKEGRSMMMLLSPKKSS

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=165, Percent_Identity=49.6969696969697, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 20627; Mature: 20496

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEKKNNRNLPQVNEKIRVPKVRAVDADGQQLGIVETREALRMAQEKGLDLVMVSDKAD
CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCC
PPVCRIIDYGKYLFEQKKKVQDAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEHHHHHHHHHCC
DKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQAPKKEGRSMMMLLSPKKSS
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
>Mature Secondary Structure 
PIEKKNNRNLPQVNEKIRVPKVRAVDADGQQLGIVETREALRMAQEKGLDLVMVSDKAD
CCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCC
PPVCRIIDYGKYLFEQKKKVQDAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEHHHHHHHHHCC
DKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQAPKKEGRSMMMLLSPKKSS
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA