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The map label for this gene is lytB [H]

Identifier: 113474728

GI number: 113474728

Start: 1450074

End: 1451684

Strand: Reverse

Name: lytB [H]

Synonym: Tery_0918

Alternate gene names: 113474728

Gene position: 1451684-1450074 (Counterclockwise)

Preceding gene: 113474731

Following gene: 113474724

Centisome position: 18.73

GC content: 34.57

Gene sequence:

>1611_bases
TTGTTGGCAAAAAAATCTCAAAAAATCATCAAAAATACAATTTTTATAACAGCTTTGTTACTAGGATTAAATATAACACC
AGTCAAAGCCGTAGAAGAATATAACAGATTACTCAAAATAGGAATTATACAAAGATTTGGTGCTAAACCAAAAGATAAAA
TTATTATTAAAGCTACTCCAGGAGATAAATTGACTTTGCGGTTTAAAACTCCTGCAGGAGAAGAAACTCTTACTACTGAA
AAAGTAGAACTAAAAATTAAAGTTAAACCTCTAAAAAAACCTCTTTTAAAAGAGCGATTAATTCTTAGTAGTCACCGTAG
TTATGAAAATGCTGAAGAAGATGCCCAGTTATGGAAAAAGAAAGGAATAGAAGTAGAAGTAGCTCAACCAGGTAGATGGA
AAGTTTGGGGAAAAAGAGAAGTATATAAAACTCCTTTATTACGACGCTGGCTATTAGAAAGTCTACAAGCTAATAATAAT
ACAAATATCTATCTTGAGCTGGAAGCTTTAAAACAAAGGCCTACAGCTTACTGGAGTATGAATGGCTATATTTATCATCG
CCATGAACTATATATTACTGCGGGGAAAAATGAAGTTATCATCAATAATCAATTTAACCAAGACAGAGCAACACTAGAAG
AACGACGTTATGTAGGCTCGTTAAAACTACAACCTAATGCTTATGGTACTTATACATTAGTTAATAATGTACCAATAGAA
ACTTACATTCGGGGAGTAGTACCCCATGAATTAGGGGCTTGGCCACCAAAAGCATCCCTAGAAGCTCAATCAATTTTAGC
TAGAACTTATGCACTGAAAAATTTACATCGGTTTATGGTAGATAATTATGAGTTATGTGCTAATACTCACTGTCAGGTTT
ATAAAGGATTAGATGTCTACCCAGAAACAGATGCGGCAGTAACAGCAACTAGGGGAAAAGTTTTGACTTATAAAGATGAG
TTGATAGATGCAGTTTATTTTGCTGTTAGTGGTGGTGTTACTGCAGCTTTTAATGATTTGTGGAATGGTACTAAACGTCC
TTATTTAATACCTGTTGTTGATGCTACTAATAATATTTGGGATATATCTAAAAATAGTTTAGCAACTGATCAAAATTTCC
GTAAGTTTATGAGTATTAAAAAAGGATTTAATGAAGATGGTTGGAGAGAATTTCGCTGGCGGGAGGTGGTTAGTTTACCG
GATATATCTGGTTATTTAAGGGGTTATTTTCAAAGGAAAAAAAGTCCTTTTGCTCAGTTTAATACTATTAAAAAAGTAGC
GGTGACGAAGCGATCGCTAGCTGGTCGTGTTCTGAAAATGACTGTGGAAACAGATAGAGGAATTATAGAGTTAAATAAAG
ACGAGGTACAAAATGCTTTTTGGGTCCCTTGGAGCACACTGTTTTATCTAGACTCTATATACAAACCCGATAAAACTTTG
TGGGGTTACGCTTTTGTTGGCGGTGGTTTTGGACATGGAGTAGGCTTGAGTCAGAAAGGTTCAATTAAGTTAGCTGAGTT
AGGTTGGAGTAGCGATCGCATTCTCAGTTTTTATTTTCCGGGAACTGAAGTCCAAACTCTTAGTAAGTTAGCTAATTTTG
GAAAAAAATAG

Upstream 100 bases:

>100_bases
ATTTTTTTTATAAAAATTATTTTTTTATTTGATAGTTTTTTATATATACTCATTTTGATGTAAAATAATTATCAAATAAA
TACTACATAGGTGAATAAAA

Downstream 100 bases:

>100_bases
ATAGTTATAGCTATAGTTGGGTAAATAGATTAGCTGTTTATCGTTAATTCTAATCAATTAGAAAACAATTAAAAAATCCT
AAATTGTCATACATTCTAAG

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MLAKKSQKIIKNTIFITALLLGLNITPVKAVEEYNRLLKIGIIQRFGAKPKDKIIIKATPGDKLTLRFKTPAGEETLTTE
KVELKIKVKPLKKPLLKERLILSSHRSYENAEEDAQLWKKKGIEVEVAQPGRWKVWGKREVYKTPLLRRWLLESLQANNN
TNIYLELEALKQRPTAYWSMNGYIYHRHELYITAGKNEVIINNQFNQDRATLEERRYVGSLKLQPNAYGTYTLVNNVPIE
TYIRGVVPHELGAWPPKASLEAQSILARTYALKNLHRFMVDNYELCANTHCQVYKGLDVYPETDAAVTATRGKVLTYKDE
LIDAVYFAVSGGVTAAFNDLWNGTKRPYLIPVVDATNNIWDISKNSLATDQNFRKFMSIKKGFNEDGWREFRWREVVSLP
DISGYLRGYFQRKKSPFAQFNTIKKVAVTKRSLAGRVLKMTVETDRGIIELNKDEVQNAFWVPWSTLFYLDSIYKPDKTL
WGYAFVGGGFGHGVGLSQKGSIKLAELGWSSDRILSFYFPGTEVQTLSKLANFGKK

Sequences:

>Translated_536_residues
MLAKKSQKIIKNTIFITALLLGLNITPVKAVEEYNRLLKIGIIQRFGAKPKDKIIIKATPGDKLTLRFKTPAGEETLTTE
KVELKIKVKPLKKPLLKERLILSSHRSYENAEEDAQLWKKKGIEVEVAQPGRWKVWGKREVYKTPLLRRWLLESLQANNN
TNIYLELEALKQRPTAYWSMNGYIYHRHELYITAGKNEVIINNQFNQDRATLEERRYVGSLKLQPNAYGTYTLVNNVPIE
TYIRGVVPHELGAWPPKASLEAQSILARTYALKNLHRFMVDNYELCANTHCQVYKGLDVYPETDAAVTATRGKVLTYKDE
LIDAVYFAVSGGVTAAFNDLWNGTKRPYLIPVVDATNNIWDISKNSLATDQNFRKFMSIKKGFNEDGWREFRWREVVSLP
DISGYLRGYFQRKKSPFAQFNTIKKVAVTKRSLAGRVLKMTVETDRGIIELNKDEVQNAFWVPWSTLFYLDSIYKPDKTL
WGYAFVGGGFGHGVGLSQKGSIKLAELGWSSDRILSFYFPGTEVQTLSKLANFGKK
>Mature_536_residues
MLAKKSQKIIKNTIFITALLLGLNITPVKAVEEYNRLLKIGIIQRFGAKPKDKIIIKATPGDKLTLRFKTPAGEETLTTE
KVELKIKVKPLKKPLLKERLILSSHRSYENAEEDAQLWKKKGIEVEVAQPGRWKVWGKREVYKTPLLRRWLLESLQANNN
TNIYLELEALKQRPTAYWSMNGYIYHRHELYITAGKNEVIINNQFNQDRATLEERRYVGSLKLQPNAYGTYTLVNNVPIE
TYIRGVVPHELGAWPPKASLEAQSILARTYALKNLHRFMVDNYELCANTHCQVYKGLDVYPETDAAVTATRGKVLTYKDE
LIDAVYFAVSGGVTAAFNDLWNGTKRPYLIPVVDATNNIWDISKNSLATDQNFRKFMSIKKGFNEDGWREFRWREVVSLP
DISGYLRGYFQRKKSPFAQFNTIKKVAVTKRSLAGRVLKMTVETDRGIIELNKDEVQNAFWVPWSTLFYLDSIYKPDKTL
WGYAFVGGGFGHGVGLSQKGSIKLAELGWSSDRILSFYFPGTEVQTLSKLANFGKK

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 61295; Mature: 61295

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKKSQKIIKNTIFITALLLGLNITPVKAVEEYNRLLKIGIIQRFGAKPKDKIIIKATP
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GDKLTLRFKTPAGEETLTTEKVELKIKVKPLKKPLLKERLILSSHRSYENAEEDAQLWKK
CCEEEEEEECCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KGIEVEVAQPGRWKVWGKREVYKTPLLRRWLLESLQANNNTNIYLELEALKQRPTAYWSM
CCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEE
NGYIYHRHELYITAGKNEVIINNQFNQDRATLEERRYVGSLKLQPNAYGTYTLVNNVPIE
CCEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHH
TYIRGVVPHELGAWPPKASLEAQSILARTYALKNLHRFMVDNYELCANTHCQVYKGLDVY
HHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCC
PETDAAVTATRGKVLTYKDELIDAVYFAVSGGVTAAFNDLWNGTKRPYLIPVVDATNNIW
CCCCCEEEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCEE
DISKNSLATDQNFRKFMSIKKGFNEDGWREFRWREVVSLPDISGYLRGYFQRKKSPFAQF
ECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
NTIKKVAVTKRSLAGRVLKMTVETDRGIIELNKDEVQNAFWVPWSTLFYLDSIYKPDKTL
HHHHHHHHHHHHHCCEEEEEEEECCCCEEEECHHHHCCEEECCHHHHHHHHHHCCCCCCE
WGYAFVGGGFGHGVGLSQKGSIKLAELGWSSDRILSFYFPGTEVQTLSKLANFGKK
EEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAKKSQKIIKNTIFITALLLGLNITPVKAVEEYNRLLKIGIIQRFGAKPKDKIIIKATP
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GDKLTLRFKTPAGEETLTTEKVELKIKVKPLKKPLLKERLILSSHRSYENAEEDAQLWKK
CCEEEEEEECCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KGIEVEVAQPGRWKVWGKREVYKTPLLRRWLLESLQANNNTNIYLELEALKQRPTAYWSM
CCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEE
NGYIYHRHELYITAGKNEVIINNQFNQDRATLEERRYVGSLKLQPNAYGTYTLVNNVPIE
CCEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHH
TYIRGVVPHELGAWPPKASLEAQSILARTYALKNLHRFMVDNYELCANTHCQVYKGLDVY
HHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCC
PETDAAVTATRGKVLTYKDELIDAVYFAVSGGVTAAFNDLWNGTKRPYLIPVVDATNNIW
CCCCCEEEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCEE
DISKNSLATDQNFRKFMSIKKGFNEDGWREFRWREVVSLPDISGYLRGYFQRKKSPFAQF
ECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
NTIKKVAVTKRSLAGRVLKMTVETDRGIIELNKDEVQNAFWVPWSTLFYLDSIYKPDKTL
HHHHHHHHHHHHHCCEEEEEEEECCCCEEEECHHHHCCEEECCHHHHHHHHHHCCCCCCE
WGYAFVGGGFGHGVGLSQKGSIKLAELGWSSDRILSFYFPGTEVQTLSKLANFGKK
EEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]