| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474714
Identifier: 113474714
GI number: 113474714
Start: 1421097
End: 1421984
Strand: Direct
Name: 113474714
Synonym: Tery_0901
Alternate gene names: NA
Gene position: 1421097-1421984 (Clockwise)
Preceding gene: 113474707
Following gene: 113474715
Centisome position: 18.34
GC content: 31.31
Gene sequence:
>888_bases ATGAAAAAAATGTTCAAGTTCAGGCTATTAAATCAAAATTCTATCTCTGAGAATCTCGAAAAATATCAAAGACTTACTTA TCCTCCTTATCGTCCTATCCTAGATAATCTTCTAGATTCCAAATACATTGCTATAAGTGCAGAAGATAATCAAGAAATAT TAGGATTGACTATAGGAAAAATAGATTATAAAAAAAATATTGGGGAAGTTTTGTCTCTGTTTGTTATACCAGAATATCGA AGACAAGGCATTGGTAATCAGTTATTGGTTGCCCTAGAAACAGAGTTCAGGGGGAAAAATTGCCAACAAATTGATTTGAT TTATATTCCCAACCAAACAATTATTGCTTTGGAAAAAATATTTCAGAAAAATGCCTGGTCTAAGCCTAAAGCTCGTATGT TAATTGGTCTGGGAGAGCGAGAAACTATCAAAAACATGGCTTGGTTAAATCTAGATCAGAAATTACCATTAGGTTATGAA ATCTTTCCCTGGGGAGAATTAACTTCTAAGGAAAGAACAATTCTTGAAAAATCACTTTGGTATCCAGATATTTTATCCCC TTTCACTGAAGAGGATATTATTGAACCAATCAATAGTTTGGGTTTAAGATACAATCATCAAGTAGTAGGTTGGATGATTA CTCATCGAATTTCAGAGAATACTATTCGTTACACTATACTTTTTGTTAAAGAAGAACTGCAATCTATTGGTAGAGGAATT GCTCTTCTTGCACGAGCAATTAAATTAAATTTAAATCATCCTGAAATTAATCAAGGTAGTTTTGCTCTTTTGATTAATAA TGAAAAAATGGCTAAGTTTACCGAAAGAAGATTAAAACCTTATTTAGCTTCTTTTCGTCAATCTTTTATTAGTAGTAAGT TAACGTAA
Upstream 100 bases:
>100_bases ATTCTATCAACATTCCTCACAGGATTATCAACTGGTACCCTAATCACTACTAATACAGTTATGATTGATTCTAGACTAGA GTTGTAGTAGGTATAAAAAA
Downstream 100 bases:
>100_bases AATTCGTAGTTTTTCTTTTTTCTCTCTAACTCTTTTGGCACCTGTTGAAGCACGATCGCGAATTTGATACATCCACCACG GCGCGAATGTCGGGGAAAAC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKKMFKFRLLNQNSISENLEKYQRLTYPPYRPILDNLLDSKYIAISAEDNQEILGLTIGKIDYKKNIGEVLSLFVIPEYR RQGIGNQLLVALETEFRGKNCQQIDLIYIPNQTIIALEKIFQKNAWSKPKARMLIGLGERETIKNMAWLNLDQKLPLGYE IFPWGELTSKERTILEKSLWYPDILSPFTEEDIIEPINSLGLRYNHQVVGWMITHRISENTIRYTILFVKEELQSIGRGI ALLARAIKLNLNHPEINQGSFALLINNEKMAKFTERRLKPYLASFRQSFISSKLT
Sequences:
>Translated_295_residues MKKMFKFRLLNQNSISENLEKYQRLTYPPYRPILDNLLDSKYIAISAEDNQEILGLTIGKIDYKKNIGEVLSLFVIPEYR RQGIGNQLLVALETEFRGKNCQQIDLIYIPNQTIIALEKIFQKNAWSKPKARMLIGLGERETIKNMAWLNLDQKLPLGYE IFPWGELTSKERTILEKSLWYPDILSPFTEEDIIEPINSLGLRYNHQVVGWMITHRISENTIRYTILFVKEELQSIGRGI ALLARAIKLNLNHPEINQGSFALLINNEKMAKFTERRLKPYLASFRQSFISSKLT >Mature_295_residues MKKMFKFRLLNQNSISENLEKYQRLTYPPYRPILDNLLDSKYIAISAEDNQEILGLTIGKIDYKKNIGEVLSLFVIPEYR RQGIGNQLLVALETEFRGKNCQQIDLIYIPNQTIIALEKIFQKNAWSKPKARMLIGLGERETIKNMAWLNLDQKLPLGYE IFPWGELTSKERTILEKSLWYPDILSPFTEEDIIEPINSLGLRYNHQVVGWMITHRISENTIRYTILFVKEELQSIGRGI ALLARAIKLNLNHPEINQGSFALLINNEKMAKFTERRLKPYLASFRQSFISSKLT
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34367; Mature: 34367
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMFKFRLLNQNSISENLEKYQRLTYPPYRPILDNLLDSKYIAISAEDNQEILGLTIGK CCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEEEC IDYKKNIGEVLSLFVIPEYRRQGIGNQLLVALETEFRGKNCQQIDLIYIPNQTIIALEKI CHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH FQKNAWSKPKARMLIGLGERETIKNMAWLNLDQKLPLGYEIFPWGELTSKERTILEKSLW HHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC YPDILSPFTEEDIIEPINSLGLRYNHQVVGWMITHRISENTIRYTILFVKEELQSIGRGI CCHHHCCCCHHHHHHHHHHHCCEECCEEEEHHHHHHHCCCCEEEEEEEEHHHHHHHHHHH ALLARAIKLNLNHPEINQGSFALLINNEKMAKFTERRLKPYLASFRQSFISSKLT HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKMFKFRLLNQNSISENLEKYQRLTYPPYRPILDNLLDSKYIAISAEDNQEILGLTIGK CCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEEEC IDYKKNIGEVLSLFVIPEYRRQGIGNQLLVALETEFRGKNCQQIDLIYIPNQTIIALEKI CHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH FQKNAWSKPKARMLIGLGERETIKNMAWLNLDQKLPLGYEIFPWGELTSKERTILEKSLW HHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC YPDILSPFTEEDIIEPINSLGLRYNHQVVGWMITHRISENTIRYTILFVKEELQSIGRGI CCHHHCCCCHHHHHHHHHHHCCEECCEEEEHHHHHHHCCCCEEEEEEEEHHHHHHHHHHH ALLARAIKLNLNHPEINQGSFALLINNEKMAKFTERRLKPYLASFRQSFISSKLT HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA