Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474715

Identifier: 113474715

GI number: 113474715

Start: 1422258

End: 1423010

Strand: Direct

Name: 113474715

Synonym: Tery_0902

Alternate gene names: NA

Gene position: 1422258-1423010 (Clockwise)

Preceding gene: 113474714

Following gene: 113474717

Centisome position: 18.35

GC content: 39.04

Gene sequence:

>753_bases
ATGCCAAGAAAACCTCGGAATTTTCAAATTGGACACTCTTATCACATTACGACTCGTTGTAATAACCGTGAATTTAAACT
ATCCAGGCGCGAATGTCGGGAAGTATTTCTTTATGCAATAAAAAAGGTTAGCACCAAATACAATTTTCGGCTTTATGCTT
TGTGCATTATGTCCAATCATGTTCATTATTTGATTGAACCGTTGCAACCAGAAGATTTACCAAAAATTATGCACTACCTC
AACTGGTACACAGCTATGTGTTTCAACAGAATGTTAAAACGTACGGGGCATTTTTGGGAAAAACGATATTACTGCAATGG
GTTTCCTTCCTCAGATAGAGAAAGAGCATTGAATACTTTACGCTACATCCACGGTAATCCTAAAGCGGCCAAAATGCGTT
GCGGCTTTTTCTATGATTTTAGTAACTATGGTAGCTACGAATGTTTGACTAATGATGGCCTGACTCAATGGCATCCGGCT
TTCTTAGAGTTGGCCAATACTCTGGACCAATGTGCCCAGAAATATAAGGAATTTTGTAAGAAATATAAGTCCAAACAAAA
AGATTCGAGAAAGTGCCACTGGGGCAGCAAACTTTTAGGGGGTATTGTGCTGTCTTTTGATGGCCGAAATTCTCGCTCTG
CTAAGAAGAAAAAGTTATCAACTCCTTTTGACTTTCCGCCGACGGTGATGCCAGACAATGAAGAATTAGCAAAGGTAGTT
AGTCAATTTGTTGTAGCTAATAGACCGAATTAG

Upstream 100 bases:

>100_bases
CGCCTCCACCATTCGTCTCGTCCCACATTGACCGCTCCTTTGACGGCTCCTAGTTGTTCTTTTTTCTCTCTTACTTTTGA
CTTTTGACTTGAAATGAATT

Downstream 100 bases:

>100_bases
CAGAAAAAAAAAATGTAATACCTAGGTTTTAGCTTTAGTTCATAGTTCAGTTCTTTTAAACTATTTCCCCTAAGCAAGCA
AAAGAACTTTTCATAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPRKPRNFQIGHSYHITTRCNNREFKLSRRECREVFLYAIKKVSTKYNFRLYALCIMSNHVHYLIEPLQPEDLPKIMHYL
NWYTAMCFNRMLKRTGHFWEKRYYCNGFPSSDRERALNTLRYIHGNPKAAKMRCGFFYDFSNYGSYECLTNDGLTQWHPA
FLELANTLDQCAQKYKEFCKKYKSKQKDSRKCHWGSKLLGGIVLSFDGRNSRSAKKKKLSTPFDFPPTVMPDNEELAKVV
SQFVVANRPN

Sequences:

>Translated_250_residues
MPRKPRNFQIGHSYHITTRCNNREFKLSRRECREVFLYAIKKVSTKYNFRLYALCIMSNHVHYLIEPLQPEDLPKIMHYL
NWYTAMCFNRMLKRTGHFWEKRYYCNGFPSSDRERALNTLRYIHGNPKAAKMRCGFFYDFSNYGSYECLTNDGLTQWHPA
FLELANTLDQCAQKYKEFCKKYKSKQKDSRKCHWGSKLLGGIVLSFDGRNSRSAKKKKLSTPFDFPPTVMPDNEELAKVV
SQFVVANRPN
>Mature_249_residues
PRKPRNFQIGHSYHITTRCNNREFKLSRRECREVFLYAIKKVSTKYNFRLYALCIMSNHVHYLIEPLQPEDLPKIMHYLN
WYTAMCFNRMLKRTGHFWEKRYYCNGFPSSDRERALNTLRYIHGNPKAAKMRCGFFYDFSNYGSYECLTNDGLTQWHPAF
LELANTLDQCAQKYKEFCKKYKSKQKDSRKCHWGSKLLGGIVLSFDGRNSRSAKKKKLSTPFDFPPTVMPDNEELAKVVS
QFVVANRPN

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29637; Mature: 29506

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKPRNFQIGHSYHITTRCNNREFKLSRRECREVFLYAIKKVSTKYNFRLYALCIMSNH
CCCCCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCC
VHYLIEPLQPEDLPKIMHYLNWYTAMCFNRMLKRTGHFWEKRYYCNGFPSSDRERALNTL
HHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEECCCCCCHHHHHHHHH
RYIHGNPKAAKMRCGFFYDFSNYGSYECLTNDGLTQWHPAFLELANTLDQCAQKYKEFCK
HHHCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYKSKQKDSRKCHWGSKLLGGIVLSFDGRNSRSAKKKKLSTPFDFPPTVMPDNEELAKVV
HHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SQFVVANRPN
HHHHHHCCCC
>Mature Secondary Structure 
PRKPRNFQIGHSYHITTRCNNREFKLSRRECREVFLYAIKKVSTKYNFRLYALCIMSNH
CCCCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCC
VHYLIEPLQPEDLPKIMHYLNWYTAMCFNRMLKRTGHFWEKRYYCNGFPSSDRERALNTL
HHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEECCCCCCHHHHHHHHH
RYIHGNPKAAKMRCGFFYDFSNYGSYECLTNDGLTQWHPAFLELANTLDQCAQKYKEFCK
HHHCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYKSKQKDSRKCHWGSKLLGGIVLSFDGRNSRSAKKKKLSTPFDFPPTVMPDNEELAKVV
HHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SQFVVANRPN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA