| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474687
Identifier: 113474687
GI number: 113474687
Start: 1381500
End: 1382981
Strand: Direct
Name: 113474687
Synonym: Tery_0870
Alternate gene names: NA
Gene position: 1381500-1382981 (Clockwise)
Preceding gene: 113474686
Following gene: 113474689
Centisome position: 17.83
GC content: 32.32
Gene sequence:
>1482_bases ATGCAACCAATATCTCATCAATCAAATAAATGGTTTGTTATTGGAATAGCTAGCATATTTCTATTTTCAGCAATTCTGAG ATTTTGGCAATTAGGTCGTTTTAATACCCTCGTTTTTGACGAGGTTTATTATGCTAAATTTGCTAATAACTATCTTACTC AAACTGAATTTTTTAACGCCCATCCTCCCCTCAGTCAATATATAATTGCAATTGGTATTTGGATAGGTTCTCATTTACCC TTTGGGCAAGAAATAGTTAATAATGAAACAGGTTCTACTTTAGCCGCTTGGAGTTATCGGTGGGTAAATGCTTTAACAGG TTCATTTATTCCTCTGGTAGTGGGAGCGATCGCCTATAAATTAACACACCGTTGGAGTTATAGTTTGATAGCTACTTTAC TCATGGCTTTAGACGGATTATTTTTAGTTGAGTCTCGTTATGCTCTGAATAATATTTATCTAGTAATTTTTGGATTATTA GCTCATTTGTGTTTAATTGTTGCTCTACAAAATAATCAATTAAAACAAAAAAAATGGTTAGTTTTATCAGGAATATTTTT TGGTGCAAGTACAGCGATAAAATGGAATGGTTTGGGATTTTTGTTAGGCATTTATTTACTCTGGATATTGGTATGGATAA TTAAATTTTTTATTCAACAAAAAAAATATGAATATACATCTGCTTGGCAAAATTTAACTCGAATCAATCTGATTCAATTA ATTCTAAACTTATTCATTATTCCCATAATTACCTATAGTTTACTGTGGATTCCCCACATTATTCTCAACCCTAAATACGG TTTTTTAGAAATGCAGGAACAGATTTTCAGCTATCACCAAAGAATTGGTAGTGGAGCTGATATTCATCCTTATTGCGCTC AATGGTTTACCTGGCCCTTAATGATGAGACCTGTAGTTTATTTTTATAAGAATACGGGTTTACTAGACAAACCAGAACCT TCTTTAGCAACACTATATTCAGATATTATATCTCCCCAACTTAATCCTATAATTTTTGATGTTCATGCCATGGGAAATCC TATTCTTTGGTGGTTCTCAACATGGGGAATTTTATTATTAATCTTGATGTTATTTAATCGTGTTTGGCATTGGGAAAAAA ATAGACAAGCTAGGCGTAAAAAAATCAAATTAAACCATCTTTTTAAATTCCCACCTCCCTCAGAAATGTGGTTATTACTA TATTTAGTTATAAATTGGCTAAGTAATTTTATGCCTTGGAGTAGAGTAAGTCGTTGTACTTTTTTGTATCATTATATGGG AGCTTTAGTATTTGCTATTTTGGGGTTTTCTTGGTGCTTAGATAGGTGGTTAAATAGTCAGCAAGCTTCCTTGAGAATAA TGGGAGTCACAATGATTTTTATAGTTTTATTTGCCTTTGTTTTTTGGATGCCTATTTATTTAGGATTACCTTTATCTCCC CAAAATTGGCAGTTCAGAATGTGGTTTCGGTCTTGGATTTAA
Upstream 100 bases:
>100_bases AACAGCCCTATTTGTTTGAAATAAAGGGGCTGTTTTTTATTGATTTTTACTAAACTTAGAAGTCAGTCAAACTCAATTAT ACTCAATTACCTAACAATTT
Downstream 100 bases:
>100_bases TTAAATATTAGCTCTTAGTATTTTCGTACCAAAATTATACTATTTATCAAAAACTTTTCTACATTTCCCCATAGCAGATA ACCCACCTCTGACCTTTAAT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Integral Membrane Protein; Dolichyl-Phosphate-Mannose-Protein O-Mannosyl Transferase; Family; Olichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP QNWQFRMWFRSWI
Sequences:
>Translated_493_residues MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP QNWQFRMWFRSWI >Mature_493_residues MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP QNWQFRMWFRSWI
Specific function: Unknown
COG id: COG1928
COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209870082, Length=262, Percent_Identity=24.4274809160305, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI116517317, Length=262, Percent_Identity=24.4274809160305, Blast_Score=67, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321638, Length=262, Percent_Identity=25.5725190839695, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24662757, Length=201, Percent_Identity=27.363184079602, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58115; Mature: 58115
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCC HPPLSQYIIAIGIWIGSHLPFGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYK CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLLAHLCLIVALQNNQLKQKKWL HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL HEEHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MMRPVVYFYKNTGLLDKPEPSLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH ILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLLYLVINWLSNFMPWSRVSRCT HHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH FLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC QNWQFRMWFRSWI CCCEEEHHHHHCC >Mature Secondary Structure MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCC HPPLSQYIIAIGIWIGSHLPFGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYK CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLLAHLCLIVALQNNQLKQKKWL HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL HEEHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MMRPVVYFYKNTGLLDKPEPSLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH ILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLLYLVINWLSNFMPWSRVSRCT HHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH FLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC QNWQFRMWFRSWI CCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA