| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474686
Identifier: 113474686
GI number: 113474686
Start: 1377289
End: 1379997
Strand: Direct
Name: 113474686
Synonym: Tery_0869
Alternate gene names: NA
Gene position: 1377289-1379997 (Clockwise)
Preceding gene: 113474685
Following gene: 113474687
Centisome position: 17.77
GC content: 35.77
Gene sequence:
>2709_bases ATGACGGATAGAAAACTCTTAATGGAACAAATTCAGGACCACCTAAACCAGAGTTTACAACTTCAAGATTCACAAGTTCA AGTAAACGTAATAAGAATGTCAACAGGTGGGCTAAAAATTATAATTATTACTAGTTTATTTCAGGAACAATCTTTAGAAG AGCGAGAAGACAAAATTGATGAAATATTAGCAAATATAGATTTGAATTTGAATAAATATCCAATTTTAAGCTATGATTTG TTAACTCCTGAAGAAGCAATAGAAGAACCTTTTGAATCTACTCAACCTCAGTTACCTTTGTGGTCAAATATTTTAATGGC ACCAGAACCTGATGTACAAAAAAAATCAGATGAAGAAGATATTTTTAAAACTCCTTTAGTTGTGACATTCTATTCTTTTC GAGGAGGGGTTGGTCGTTCTACGGCATTGGGTTTAGTTGCTGGAATATTAGCTACTGAAAAAAAACGTCGAGTAGTAATA CTAGATTTTGATTTAGAAGCACCAGGAATTTCAATTTTATTGGAGCCAGATATTTCTAAATTGAGTCCAGAAAATTATGG TGTATTAGATTATTTATACCAACGCTTTATCTCCCCGGAAGAAAATTTTCCTCCCATTGAACGTTGTATTTATCAAGTAA AATTAAAAGCCCGCGGTGACTTATTTGTGGTTCCGGTTGGGGAATATGATGAATATTATATTCATCGTTTAGCTGAACTA GACAGGGGTACTTTGCAGGCTTTTTATCATCGAGAAAATAATCCAGTTGAACAACTAATTGAAGATATTAAAAAGCAATT AAATCCTGATGTGATTTTAATTGATGCCCGTCCTGGATTTAATGATACTAGTGCTATTGCTTTATTAGATTTAGCTGATA CAGGAATTATCTGTTTTTCACCTACTGACCAAAGTTTTAAAGGATTAAGTTGGGTGGTAAAAAGTGTTCGTAAACAATGG GAATATCAAGGGAAACCAGATTTGAGTTTTGTCCTAACACCTATACCTCCTGTTGCTCAAGAACAACGTCAAGTTTGGAT AAGTAATGTTGAAGATTGGATAGAAGAAAACTGGGGGTTACCAAATGATAAAACAGTCAGCGACACTTACTATGAAGTTA ACTACAATCCTACCCTTAGCACTTTATCAAGTCTAGTTAATAATTTACCTAAAAGTTTACTGGATAATTATCTTTCAATT GCAGAATCAATTGATGCTAGTTTGCCAGATATTAAACCTCATTTAAAAACCACTAATGTTCTTAATAAAGATACTAAAGA AGCTGTTTTAAAGGAGTTAAAATTTTCAGCAGTAACAGCACAAGATATAGAAGTAGAAAAGATTCCAGATATATTCCAAC GCACAGGAGATTTCCCCAATTTTTTAAACGATAAAACTTGGTTGATTCGAGGTGCAAAAGGAACAGGAAAAAGCTTATTA TTTAGACTTTTTGTAGAACAAACATTAAAAGACAAAGCAAAAAAATTAGCTGAAGAATCTGGTAAAAACATAGATAATTT TTATTGTATTCCTGGTCATGGTAAAGCTACAATAAAAAGGTCTATTTTAGAGGGTACCGCCCTAGCTAGTTATGAAGAGC AGGCGGGAGATAATTGCTGGAGATGTTTTTGGTCAAATTATGCTTTATTACAATTATGTTATTCTTTGCCACAAAAGTCG CTCCCTAATATTAATGAGAATTTAAAAGCTTTAATAGATACTGAGGAACCCAGAAGCGGTGATATAGTTTCGTGGTTAGT TGACCAAGCAAAATCATCAACAGCTAGTGTCGAAACTCTTGATCAACTACGAGATGTTAACTCATACTTACAAGAAAATA ATCGGCGAGTGTGGCTCCTCTATGATGAGTTAGATACAGGATTTGGCCATAGTCAAGAAGACTATCGGCGACGAAGAGAA GCATTAGAAGCTTTGCTGGCTTGGTGGTTAGAAAGTGGTATCAGCCTGGAATATATTGTGCCTAAGATATTTTTACGAGA GGATATTTGGAATAAACTTAACTTTACTAACAAAGGACATTTTGCCAGTGGGCGAACGCTTGAATTGAAGTGGGAAGAAG CTGATCTGTGGCGACTTGTACTGCGCCAAGCTCTTCAATTATCTGATAGTCTTAGTCAAACTATTAGTCAGGAGTCAGGA GTAACAGTTGAACGACTTGAGAAGACTGAATTAAAGCAATTACGCCAAAGCCTTTTTCCTCTGTGGGGAGAAAAGATGGG TAGTGGCAACAAGAGTTACATTTACAACTGGATACGGAAACGAACCGCTGACAGCCAAGATAATAGTTTTCCCCGAAGCT TGATATTACTTTTAGAGCAAGCAGTCGAAAGAGAGAAAAATTACTCCAAAGAATATAGTGATCCAAGAATTTTGCGCCCA AAGTCATTAACTGATGCTTTGCCAGAGGTATCTAAGCAGCGTGTCGATGAAGTGTGCAACGAATATCCCGAACTTGAGGC ACTGTTAAAGAAACTCCGGGGTGAACGCTCACCTATTGATGAAAAACAACTAACAAAAATATGGAACATTAAAGGTACAA AGTTAAATGCTCGTCTCCAGGAAATGATTGATGCAGGTATTTTTAAAGAGTATTCACGCCGTAAAAATGTCTCCCCAGAT GTCCGGGTTTATAGTGTTGCTGAACTATATTTGTATGGATTGGGTATGACTCGTAAGGGACAGCGCTAG
Upstream 100 bases:
>100_bases AGTAAAAATACTACATGGATATTTCTTGGCAAAACTACAAGCTTATTGATGCAGTAAAAAAACTACATAGATATTTATTG AGCAAACAAGGAGAAGGCTA
Downstream 100 bases:
>100_bases GCCAAAAATATTCAGGGCTTACTTATAGCCACCTTAATATAGTAGGGTTTTTCATCTTGTGGAGCACTCCGTTGACCTTT ACAAATTTGATATATTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MTDRKLLMEQIQDHLNQSLQLQDSQVQVNVIRMSTGGLKIIIITSLFQEQSLEEREDKIDEILANIDLNLNKYPILSYDL LTPEEAIEEPFESTQPQLPLWSNILMAPEPDVQKKSDEEDIFKTPLVVTFYSFRGGVGRSTALGLVAGILATEKKRRVVI LDFDLEAPGISILLEPDISKLSPENYGVLDYLYQRFISPEENFPPIERCIYQVKLKARGDLFVVPVGEYDEYYIHRLAEL DRGTLQAFYHRENNPVEQLIEDIKKQLNPDVILIDARPGFNDTSAIALLDLADTGIICFSPTDQSFKGLSWVVKSVRKQW EYQGKPDLSFVLTPIPPVAQEQRQVWISNVEDWIEENWGLPNDKTVSDTYYEVNYNPTLSTLSSLVNNLPKSLLDNYLSI AESIDASLPDIKPHLKTTNVLNKDTKEAVLKELKFSAVTAQDIEVEKIPDIFQRTGDFPNFLNDKTWLIRGAKGTGKSLL FRLFVEQTLKDKAKKLAEESGKNIDNFYCIPGHGKATIKRSILEGTALASYEEQAGDNCWRCFWSNYALLQLCYSLPQKS LPNINENLKALIDTEEPRSGDIVSWLVDQAKSSTASVETLDQLRDVNSYLQENNRRVWLLYDELDTGFGHSQEDYRRRRE ALEALLAWWLESGISLEYIVPKIFLREDIWNKLNFTNKGHFASGRTLELKWEEADLWRLVLRQALQLSDSLSQTISQESG VTVERLEKTELKQLRQSLFPLWGEKMGSGNKSYIYNWIRKRTADSQDNSFPRSLILLLEQAVEREKNYSKEYSDPRILRP KSLTDALPEVSKQRVDEVCNEYPELEALLKKLRGERSPIDEKQLTKIWNIKGTKLNARLQEMIDAGIFKEYSRRKNVSPD VRVYSVAELYLYGLGMTRKGQR
Sequences:
>Translated_902_residues MTDRKLLMEQIQDHLNQSLQLQDSQVQVNVIRMSTGGLKIIIITSLFQEQSLEEREDKIDEILANIDLNLNKYPILSYDL LTPEEAIEEPFESTQPQLPLWSNILMAPEPDVQKKSDEEDIFKTPLVVTFYSFRGGVGRSTALGLVAGILATEKKRRVVI LDFDLEAPGISILLEPDISKLSPENYGVLDYLYQRFISPEENFPPIERCIYQVKLKARGDLFVVPVGEYDEYYIHRLAEL DRGTLQAFYHRENNPVEQLIEDIKKQLNPDVILIDARPGFNDTSAIALLDLADTGIICFSPTDQSFKGLSWVVKSVRKQW EYQGKPDLSFVLTPIPPVAQEQRQVWISNVEDWIEENWGLPNDKTVSDTYYEVNYNPTLSTLSSLVNNLPKSLLDNYLSI AESIDASLPDIKPHLKTTNVLNKDTKEAVLKELKFSAVTAQDIEVEKIPDIFQRTGDFPNFLNDKTWLIRGAKGTGKSLL FRLFVEQTLKDKAKKLAEESGKNIDNFYCIPGHGKATIKRSILEGTALASYEEQAGDNCWRCFWSNYALLQLCYSLPQKS LPNINENLKALIDTEEPRSGDIVSWLVDQAKSSTASVETLDQLRDVNSYLQENNRRVWLLYDELDTGFGHSQEDYRRRRE ALEALLAWWLESGISLEYIVPKIFLREDIWNKLNFTNKGHFASGRTLELKWEEADLWRLVLRQALQLSDSLSQTISQESG VTVERLEKTELKQLRQSLFPLWGEKMGSGNKSYIYNWIRKRTADSQDNSFPRSLILLLEQAVEREKNYSKEYSDPRILRP KSLTDALPEVSKQRVDEVCNEYPELEALLKKLRGERSPIDEKQLTKIWNIKGTKLNARLQEMIDAGIFKEYSRRKNVSPD VRVYSVAELYLYGLGMTRKGQR >Mature_901_residues TDRKLLMEQIQDHLNQSLQLQDSQVQVNVIRMSTGGLKIIIITSLFQEQSLEEREDKIDEILANIDLNLNKYPILSYDLL TPEEAIEEPFESTQPQLPLWSNILMAPEPDVQKKSDEEDIFKTPLVVTFYSFRGGVGRSTALGLVAGILATEKKRRVVIL DFDLEAPGISILLEPDISKLSPENYGVLDYLYQRFISPEENFPPIERCIYQVKLKARGDLFVVPVGEYDEYYIHRLAELD RGTLQAFYHRENNPVEQLIEDIKKQLNPDVILIDARPGFNDTSAIALLDLADTGIICFSPTDQSFKGLSWVVKSVRKQWE YQGKPDLSFVLTPIPPVAQEQRQVWISNVEDWIEENWGLPNDKTVSDTYYEVNYNPTLSTLSSLVNNLPKSLLDNYLSIA ESIDASLPDIKPHLKTTNVLNKDTKEAVLKELKFSAVTAQDIEVEKIPDIFQRTGDFPNFLNDKTWLIRGAKGTGKSLLF RLFVEQTLKDKAKKLAEESGKNIDNFYCIPGHGKATIKRSILEGTALASYEEQAGDNCWRCFWSNYALLQLCYSLPQKSL PNINENLKALIDTEEPRSGDIVSWLVDQAKSSTASVETLDQLRDVNSYLQENNRRVWLLYDELDTGFGHSQEDYRRRREA LEALLAWWLESGISLEYIVPKIFLREDIWNKLNFTNKGHFASGRTLELKWEEADLWRLVLRQALQLSDSLSQTISQESGV TVERLEKTELKQLRQSLFPLWGEKMGSGNKSYIYNWIRKRTADSQDNSFPRSLILLLEQAVEREKNYSKEYSDPRILRPK SLTDALPEVSKQRVDEVCNEYPELEALLKKLRGERSPIDEKQLTKIWNIKGTKLNARLQEMIDAGIFKEYSRRKNVSPDV RVYSVAELYLYGLGMTRKGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103654; Mature: 103523
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRKLLMEQIQDHLNQSLQLQDSQVQVNVIRMSTGGLKIIIITSLFQEQSLEEREDKID CCCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH EILANIDLNLNKYPILSYDLLTPEEAIEEPFESTQPQLPLWSNILMAPEPDVQKKSDEED HHHHHCCCCCCCCCEEEEECCCCHHHHHCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHH IFKTPLVVTFYSFRGGVGRSTALGLVAGILATEKKRRVVILDFDLEAPGISILLEPDISK HHHCCHHEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCHHH LSPENYGVLDYLYQRFISPEENFPPIERCIYQVKLKARGDLFVVPVGEYDEYYIHRLAEL CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHH DRGTLQAFYHRENNPVEQLIEDIKKQLNPDVILIDARPGFNDTSAIALLDLADTGIICFS CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEC PTDQSFKGLSWVVKSVRKQWEYQGKPDLSFVLTPIPPVAQEQRQVWISNVEDWIEENWGL CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC PNDKTVSDTYYEVNYNPTLSTLSSLVNNLPKSLLDNYLSIAESIDASLPDIKPHLKTTNV CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LNKDTKEAVLKELKFSAVTAQDIEVEKIPDIFQRTGDFPNFLNDKTWLIRGAKGTGKSLL HCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH FRLFVEQTLKDKAKKLAEESGKNIDNFYCIPGHGKATIKRSILEGTALASYEEQAGDNCW HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RCFWSNYALLQLCYSLPQKSLPNINENLKALIDTEEPRSGDIVSWLVDQAKSSTASVETL HHHHCCHHHHHHHHHCCHHCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHCCCHHHHHHH DQLRDVNSYLQENNRRVWLLYDELDTGFGHSQEDYRRRREALEALLAWWLESGISLEYIV HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH PKIFLREDIWNKLNFTNKGHFASGRTLELKWEEADLWRLVLRQALQLSDSLSQTISQESG HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTVERLEKTELKQLRQSLFPLWGEKMGSGNKSYIYNWIRKRTADSQDNSFPRSLILLLEQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AVEREKNYSKEYSDPRILRPKSLTDALPEVSKQRVDEVCNEYPELEALLKKLRGERSPID HHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC EKQLTKIWNIKGTKLNARLQEMIDAGIFKEYSRRKNVSPDVRVYSVAELYLYGLGMTRKG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC QR CC >Mature Secondary Structure TDRKLLMEQIQDHLNQSLQLQDSQVQVNVIRMSTGGLKIIIITSLFQEQSLEEREDKID CCHHHHHHHHHHHHCCCEEECCCEEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHH EILANIDLNLNKYPILSYDLLTPEEAIEEPFESTQPQLPLWSNILMAPEPDVQKKSDEED HHHHHCCCCCCCCCEEEEECCCCHHHHHCHHHHCCCCCCCHHCEEECCCCCCCCCCCCHH IFKTPLVVTFYSFRGGVGRSTALGLVAGILATEKKRRVVILDFDLEAPGISILLEPDISK HHHCCHHEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCHHH LSPENYGVLDYLYQRFISPEENFPPIERCIYQVKLKARGDLFVVPVGEYDEYYIHRLAEL CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHH DRGTLQAFYHRENNPVEQLIEDIKKQLNPDVILIDARPGFNDTSAIALLDLADTGIICFS CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEC PTDQSFKGLSWVVKSVRKQWEYQGKPDLSFVLTPIPPVAQEQRQVWISNVEDWIEENWGL CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC PNDKTVSDTYYEVNYNPTLSTLSSLVNNLPKSLLDNYLSIAESIDASLPDIKPHLKTTNV CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LNKDTKEAVLKELKFSAVTAQDIEVEKIPDIFQRTGDFPNFLNDKTWLIRGAKGTGKSLL HCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH FRLFVEQTLKDKAKKLAEESGKNIDNFYCIPGHGKATIKRSILEGTALASYEEQAGDNCW HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RCFWSNYALLQLCYSLPQKSLPNINENLKALIDTEEPRSGDIVSWLVDQAKSSTASVETL HHHHCCHHHHHHHHHCCHHCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHCCCHHHHHHH DQLRDVNSYLQENNRRVWLLYDELDTGFGHSQEDYRRRREALEALLAWWLESGISLEYIV HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHH PKIFLREDIWNKLNFTNKGHFASGRTLELKWEEADLWRLVLRQALQLSDSLSQTISQESG HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTVERLEKTELKQLRQSLFPLWGEKMGSGNKSYIYNWIRKRTADSQDNSFPRSLILLLEQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AVEREKNYSKEYSDPRILRPKSLTDALPEVSKQRVDEVCNEYPELEALLKKLRGERSPID HHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC EKQLTKIWNIKGTKLNARLQEMIDAGIFKEYSRRKNVSPDVRVYSVAELYLYGLGMTRKG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC QR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA