| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474685
Identifier: 113474685
GI number: 113474685
Start: 1376791
End: 1377237
Strand: Direct
Name: 113474685
Synonym: Tery_0868
Alternate gene names: NA
Gene position: 1376791-1377237 (Clockwise)
Preceding gene: 113474684
Following gene: 113474686
Centisome position: 17.76
GC content: 33.56
Gene sequence:
>447_bases TTGGATAATAACTCAGATACTTATGGCAGAACTATTTATTTAGGTGCTTCTCGACGTCGCCTTGAAGATGCTGAAGCGCT CTATAATCAAGAACGTTGGAATGGTGCTATTTACATGGGTGGTTATGCTATTGAATGCGCTCTCAAATCTCTCCTTTGTC ATGAGGAAGACATAGTGAATTTTAAGAAGACAAAAGTATTTAAGCGCTTAAAAGGTTCAAATTTACATGATTTAGAACAG CTATTAGAAGCTTCGTATATATGTAAAGGAGTTAAAGATTCAAAAAAAGATCAATCTCTTAAAAAGGCATGGGACACAGT TAAATTATGGCAAAATGATAAGTTACGATACTCAGATAAAAAGGGTGATAAAATTGAGGCTAGCAAGTTTATTTATGCAG TAAAAATACTACATGGATATTTCTTGGCAAAACTACAAGCTTATTGA
Upstream 100 bases:
>100_bases GAATAAAACTATAATTTTTGCCAATAATTAAGGATATTGAGGGTATTGTTATTGGGTAGTTTCTTAAGCAAAAATTTTAC ATTACAGGAGGTAGATTTTT
Downstream 100 bases:
>100_bases TGCAGTAAAAAAACTACATAGATATTTATTGAGCAAACAAGGAGAAGGCTAATGACGGATAGAAAACTCTTAATGGAACA AATTCAGGACCACCTAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY
Sequences:
>Translated_148_residues MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY >Mature_148_residues MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17184; Mature: 17184
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVN CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCHHHHHH FKKTKVFKRLKGSNLHDLEQLLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDK HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC KGDKIEASKFIYAVKILHGYFLAKLQAY CCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVN CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCHHHHHH FKKTKVFKRLKGSNLHDLEQLLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDK HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC KGDKIEASKFIYAVKILHGYFLAKLQAY CCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA