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The map label for this gene is hypC [H]

Identifier: 113474624

GI number: 113474624

Start: 1261083

End: 1261331

Strand: Direct

Name: hypC [H]

Synonym: Tery_0794

Alternate gene names: 113474624

Gene position: 1261083-1261331 (Clockwise)

Preceding gene: 113474623

Following gene: 113474625

Centisome position: 16.27

GC content: 36.55

Gene sequence:

>249_bases
ATGTGTTTAGGAATTCCTGGTCAAATTGTTGAAATTACCGATATTGTCAAGAAATTGGCAATGGTTAGTATTAGTGGAGT
CAAAAGAGAGGTTAATATTGCTTGCATTATTGATGAAGAACATCCGATAGAGTCTTGTGTTGGTGACTGGGTGTTAGTTC
ATGTGGGTTTTGCCATGAACCGTTTAGATGAAGAAGAAGCCACAGAAACTTTAAAATTATTGCAGGAAGTCGCTGCAGTA
ATGAATTAA

Upstream 100 bases:

>100_bases
AGTTGAGTCTTGTTTTGGTGACTGGGTATCAGTTCATATGGGCAATTCCTGTGAAGCGTTATTGATTTTAGTAAAAGTTT
GATTAACTTATTTAAGAAAA

Downstream 100 bases:

>100_bases
AAAGTAGGTTTGTTTGAGTAAGGACACATAGGCTTTTAACTTATGGTATAGTTTCTGATCATCTGTAATTATTTTTATTT
ATGCTACCAGGTTGAATTCA

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MCLGIPGQIVEITDIVKKLAMVSISGVKREVNIACIIDEEHPIESCVGDWVLVHVGFAMNRLDEEEATETLKLLQEVAAV
MN

Sequences:

>Translated_82_residues
MCLGIPGQIVEITDIVKKLAMVSISGVKREVNIACIIDEEHPIESCVGDWVLVHVGFAMNRLDEEEATETLKLLQEVAAV
MN
>Mature_82_residues
MCLGIPGQIVEITDIVKKLAMVSISGVKREVNIACIIDEEHPIESCVGDWVLVHVGFAMNRLDEEEATETLKLLQEVAAV
MN

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=48.0519480519481, Blast_Score=75, Evalue=8e-16,
Organism=Escherichia coli, GI1789083, Length=80, Percent_Identity=41.25, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 9007; Mature: 9007

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGQIVEITDIVKKLAMVSISGVKREVNIACIIDEEHPIESCVGDWVLVHVGFAMN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RLDEEEATETLKLLQEVAAVMN
HCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCLGIPGQIVEITDIVKKLAMVSISGVKREVNIACIIDEEHPIESCVGDWVLVHVGFAMN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RLDEEEATETLKLLQEVAAVMN
HCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]