Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474603

Identifier: 113474603

GI number: 113474603

Start: 1222758

End: 1223264

Strand: Direct

Name: 113474603

Synonym: Tery_0764

Alternate gene names: NA

Gene position: 1222758-1223264 (Clockwise)

Preceding gene: 113474602

Following gene: 113474604

Centisome position: 15.78

GC content: 40.43

Gene sequence:

>507_bases
ATGGTTTATATTCATCAACGGTTAGCTGATTTAGAGAAAACGATTAAAATACTTTACGAAAAACTGGGGTCTTTTGAAAA
AGAGCTAGCTATTATCTCTCCCGGTAGTGATAAAAAGTTTGAAATACAGCAACGCATTAAGACAGAAGTCTTACCGGATA
TTTTTCGTTATGAAAAGGAATACTGGGAGCTTTATCCCATGCAGGAGGTTGTTATTCCTGAAGATCAGGCGGCCAGTCAG
TTGGTACAAGTTGAGCAAGCAGTTACTTCTCTTGAAGGTTCTTTTGCTGAGTACCCTCCGGAAATGTTGGCTTTGTTGGC
AGAAATTCGAGCTAGGTTGGATGGTTTGGAGAGATCAGCTTCTGCTAAATTGAAAGTTGCTATACCTTTAATTCCGGCGA
TCGCTTCCTATGAATTGGAGATGGATACCGAAGGTGTGATGTCTAAAACCTGGAAACCTCTCAGAGGATTGATCATGAGG
TTACATCCTACCTTTTTTCGGAAATGA

Upstream 100 bases:

>100_bases
ATCTAAATTTAACGGTTTGAAAATGTCTTATAATGATGGGGGTTACTATATTTTAATAAACTGCTATATTTCAATAAATT
TTATTTTAGGATAAACATTT

Downstream 100 bases:

>100_bases
TGGCCAGTCAAAAAGCAATCCACCTGTCAATAATCATCTTTTTAAGCTCCCACTGTCAGATATTTCGACGTTTACTGGGC
GCAGGGATGAGCTGAAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MVYIHQRLADLEKTIKILYEKLGSFEKELAIISPGSDKKFEIQQRIKTEVLPDIFRYEKEYWELYPMQEVVIPEDQAASQ
LVQVEQAVTSLEGSFAEYPPEMLALLAEIRARLDGLERSASAKLKVAIPLIPAIASYELEMDTEGVMSKTWKPLRGLIMR
LHPTFFRK

Sequences:

>Translated_168_residues
MVYIHQRLADLEKTIKILYEKLGSFEKELAIISPGSDKKFEIQQRIKTEVLPDIFRYEKEYWELYPMQEVVIPEDQAASQ
LVQVEQAVTSLEGSFAEYPPEMLALLAEIRARLDGLERSASAKLKVAIPLIPAIASYELEMDTEGVMSKTWKPLRGLIMR
LHPTFFRK
>Mature_168_residues
MVYIHQRLADLEKTIKILYEKLGSFEKELAIISPGSDKKFEIQQRIKTEVLPDIFRYEKEYWELYPMQEVVIPEDQAASQ
LVQVEQAVTSLEGSFAEYPPEMLALLAEIRARLDGLERSASAKLKVAIPLIPAIASYELEMDTEGVMSKTWKPLRGLIMR
LHPTFFRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19373; Mature: 19373

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYIHQRLADLEKTIKILYEKLGSFEKELAIISPGSDKKFEIQQRIKTEVLPDIFRYEKE
CEEHHHHHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
YWELYPMQEVVIPEDQAASQLVQVEQAVTSLEGSFAEYPPEMLALLAEIRARLDGLERSA
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
SAKLKVAIPLIPAIASYELEMDTEGVMSKTWKPLRGLIMRLHPTFFRK
CCEEEEEEHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYIHQRLADLEKTIKILYEKLGSFEKELAIISPGSDKKFEIQQRIKTEVLPDIFRYEKE
CEEHHHHHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
YWELYPMQEVVIPEDQAASQLVQVEQAVTSLEGSFAEYPPEMLALLAEIRARLDGLERSA
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
SAKLKVAIPLIPAIASYELEMDTEGVMSKTWKPLRGLIMRLHPTFFRK
CCEEEEEEHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA