Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474602

Identifier: 113474602

GI number: 113474602

Start: 1221650

End: 1222027

Strand: Direct

Name: 113474602

Synonym: Tery_0763

Alternate gene names: NA

Gene position: 1221650-1222027 (Clockwise)

Preceding gene: 113474599

Following gene: 113474603

Centisome position: 15.76

GC content: 33.07

Gene sequence:

>378_bases
ATGGCTCACCTAAAAAAATACGATTCATTAGATCGTTCTTTAGAAAAAGCTTTGACAAATCAACTGATAGATAAGTATTT
TGACCATACGGAAAGTTGGCTGAGGGCTATTCTACGAAAGTGCATTTTTTCTCTTGCTTATGTGCATGAAGAAACTATTT
TAACTATTGAATGTCCAAATTTGGCTATTGCTAAAAGGTTGAGTCGTAAAACTCATCCTTTTTTATGTTTTGCAGAGTAT
TTTTCTGACTATCAAAATGATCGGGTTTTGATTTGTTATTTGGATGAGGGTAAAAGTTGGCAGTGTTTTGACTCAACTGA
AAAGTTGTGGATGCCTTTGGCTAATTTTGTTTCTTATTCTGCTCAAACTGATTATTAA

Upstream 100 bases:

>100_bases
AGTAAGAATAAGCCAGTTTTGATTCTGGCATTTAAAGGTTTATATTAATTATGTTGGCAAATAAAATAAAGCAACTGCAG
TTTAAGGTTCAGATTTAAAT

Downstream 100 bases:

>100_bases
TTTCAGACTTAATTCAAAACTAAAAAGTTGAGAAGTTTTATCTAGTTATAAGTTCTGAGTAATATCAAATCTAAAAAACT
TTTCGATGTTTTCCTAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAHLKKYDSLDRSLEKALTNQLIDKYFDHTESWLRAILRKCIFSLAYVHEETILTIECPNLAIAKRLSRKTHPFLCFAEY
FSDYQNDRVLICYLDEGKSWQCFDSTEKLWMPLANFVSYSAQTDY

Sequences:

>Translated_125_residues
MAHLKKYDSLDRSLEKALTNQLIDKYFDHTESWLRAILRKCIFSLAYVHEETILTIECPNLAIAKRLSRKTHPFLCFAEY
FSDYQNDRVLICYLDEGKSWQCFDSTEKLWMPLANFVSYSAQTDY
>Mature_124_residues
AHLKKYDSLDRSLEKALTNQLIDKYFDHTESWLRAILRKCIFSLAYVHEETILTIECPNLAIAKRLSRKTHPFLCFAEYF
SDYQNDRVLICYLDEGKSWQCFDSTEKLWMPLANFVSYSAQTDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14834; Mature: 14703

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLKKYDSLDRSLEKALTNQLIDKYFDHTESWLRAILRKCIFSLAYVHEETILTIECPN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
LAIAKRLSRKTHPFLCFAEYFSDYQNDRVLICYLDEGKSWQCFDSTEKLWMPLANFVSYS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHC
AQTDY
CCCCC
>Mature Secondary Structure 
AHLKKYDSLDRSLEKALTNQLIDKYFDHTESWLRAILRKCIFSLAYVHEETILTIECPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
LAIAKRLSRKTHPFLCFAEYFSDYQNDRVLICYLDEGKSWQCFDSTEKLWMPLANFVSYS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHC
AQTDY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA