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The map label for this gene is panD

Identifier: 113474540

GI number: 113474540

Start: 1127118

End: 1127594

Strand: Direct

Name: panD

Synonym: Tery_0692

Alternate gene names: 113474540

Gene position: 1127118-1127594 (Clockwise)

Preceding gene: 113474539

Following gene: 113474541

Centisome position: 14.54

GC content: 37.53

Gene sequence:

>477_bases
ATGACTACAATCAAATTAATGCATGCTAAACTTCATCGCGTACGAGTAACAGACGCAAAGCCTGACTACGTTGGCAGCGT
GACTATAGACTCGGATTTACTCGAAAAAGTAGGAATTTTGCCTTTAGAAGAAGTGCAAATAGTTAATCTTAATAATGGCC
AACGTTGGTTAACTTATGTTTTACCCGGACAAGCAGGATCGGGTATGGTTTGTCCAAATGGGGGTGCGGCACTTCTATGT
AAAAAAGATGATATATTAATTATCTGGGCTAATGAACAATGCGATCGGGCTGAAGTCCTAGAAAATGGACATAAAGCAAA
AATATTTGTGGCAGATGAAAATAACCACTGCCGAGAATTTCTCTATCAAATTTTAAATCCCAATCAAGGAAGTGTTGAAT
TTCACTCCCTGCCAGTAATTCCAGAAGGTAAAACATCTGAATACCTCCAACAAATGATCGAAACAAATAAAATTTAA

Upstream 100 bases:

>100_bases
GTTTTACATCGAGCCCTTTTGATGTCTATAATTTGAGTCTGTTTTCTCCCTCTATTTTTTTTAATTCCCACTGGTTGTAA
ATGTAGACAAAAAAGAAATC

Downstream 100 bases:

>100_bases
TCTTTGGAAAATAACACAGTTGAAAATAATAGGTGAGTAAATATTATACCTAATTTTATTGATTAGATATCTCCAGAAAA
AGTTTTGGCACCAGATTCCG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTTIKLMHAKLHRVRVTDAKPDYVGSVTIDSDLLEKVGILPLEEVQIVNLNNGQRWLTYVLPGQAGSGMVCPNGGAALLC
KKDDILIIWANEQCDRAEVLENGHKAKIFVADENNHCREFLYQILNPNQGSVEFHSLPVIPEGKTSEYLQQMIETNKI

Sequences:

>Translated_158_residues
MTTIKLMHAKLHRVRVTDAKPDYVGSVTIDSDLLEKVGILPLEEVQIVNLNNGQRWLTYVLPGQAGSGMVCPNGGAALLC
KKDDILIIWANEQCDRAEVLENGHKAKIFVADENNHCREFLYQILNPNQGSVEFHSLPVIPEGKTSEYLQQMIETNKI
>Mature_157_residues
TTIKLMHAKLHRVRVTDAKPDYVGSVTIDSDLLEKVGILPLEEVQIVNLNNGQRWLTYVLPGQAGSGMVCPNGGAALLCK
KDDILIIWANEQCDRAEVLENGHKAKIFVADENNHCREFLYQILNPNQGSVEFHSLPVIPEGKTSEYLQQMIETNKI

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=83, Percent_Identity=43.3734939759036, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_TRIEI (Q118E6)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_720601.1
- ProteinModelPortal:   Q118E6
- SMR:   Q118E6
- STRING:   Q118E6
- GeneID:   4245587
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_0692
- NMPDR:   fig|203124.1.peg.648
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LMHAKLH
- PhylomeDB:   Q118E6
- ProtClustDB:   PRK05449
- BioCyc:   TERY203124:TERY_0692-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 17669; Mature: 17537

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: ACT_SITE 26-26 ACT_SITE 59-59 BINDING 58-58

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIKLMHAKLHRVRVTDAKPDYVGSVTIDSDLLEKVGILPLEEVQIVNLNNGQRWLTYV
CCEEEEEEEEEEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
LPGQAGSGMVCPNGGAALLCKKDDILIIWANEQCDRAEVLENGHKAKIFVADENNHCREF
ECCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCHHHHH
LYQILNPNQGSVEFHSLPVIPEGKTSEYLQQMIETNKI
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTIKLMHAKLHRVRVTDAKPDYVGSVTIDSDLLEKVGILPLEEVQIVNLNNGQRWLTYV
CEEEEEEEEEEEEEEECCCCCEEEEEEECHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
LPGQAGSGMVCPNGGAALLCKKDDILIIWANEQCDRAEVLENGHKAKIFVADENNHCREF
ECCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCHHHHH
LYQILNPNQGSVEFHSLPVIPEGKTSEYLQQMIETNKI
HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA