Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474522

Identifier: 113474522

GI number: 113474522

Start: 1103208

End: 1103762

Strand: Direct

Name: 113474522

Synonym: Tery_0673

Alternate gene names: NA

Gene position: 1103208-1103762 (Clockwise)

Preceding gene: 113474521

Following gene: 113474523

Centisome position: 14.23

GC content: 36.76

Gene sequence:

>555_bases
ATGATTGAAAATCAAGACTCAGAAACACTTGTATTTAAAATTTCTCCTCTGATAAAACTAACTCTTTTAAGCTTATATGT
TGCATTAACTGTACCTTTGCCTTTTTTATCTCAAGCCACAAATGCGCCAGTACCCCCTTTTATTTTAGTAATAGGACTAA
CAATAGGAGCGATAGCATTATATGGAGCTCTAGCAGAAAGAGTAATAGTAAATGGTCAAGGAATTCAAGTATCCTATCCA
GCTTGGGTACCAGACCTCTTTCGCAAAGGTTGGTATTTACCTTGGACAGAAATAAAAGCTCTCAAACCTCGGACTACAGG
CCAAGGTGGTCTAGTCTACTATTTTTTGAATAACTCTGAAGAAGGTTATTTGTTGCCCATGCGAGTAGTGGGTTTTGCCA
AATTAGTTCGGATAGTAGAAACTTACACTGGTATAGATACAACTGATGTACGTCCTCTATCACAACCTTGGATGTATTTT
ATTTTATTGGGTTGTACCATACTTTTACTATTAGTAGATGCTTGGACGATCTTTAATGCAGTTGCAATTTCCTAG

Upstream 100 bases:

>100_bases
CCAGGACGGTAAAAGACTACCTCCTCAGAAATTATCAAACAAAATTTTAGTTCAAACTAGGTATAATTTTATTATGGTTA
ATTAGGCGTATTTATTCAGT

Downstream 100 bases:

>100_bases
CTAAAAAATGGAACAGCAGCAGTCTCAACTATATCTAGAAAAAGTAAGTTTAACCGCCCCAGTTAGCTCCCTGTATTTAC
TTAAAAATATTTCTTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIENQDSETLVFKISPLIKLTLLSLYVALTVPLPFLSQATNAPVPPFILVIGLTIGAIALYGALAERVIVNGQGIQVSYP
AWVPDLFRKGWYLPWTEIKALKPRTTGQGGLVYYFLNNSEEGYLLPMRVVGFAKLVRIVETYTGIDTTDVRPLSQPWMYF
ILLGCTILLLLVDAWTIFNAVAIS

Sequences:

>Translated_184_residues
MIENQDSETLVFKISPLIKLTLLSLYVALTVPLPFLSQATNAPVPPFILVIGLTIGAIALYGALAERVIVNGQGIQVSYP
AWVPDLFRKGWYLPWTEIKALKPRTTGQGGLVYYFLNNSEEGYLLPMRVVGFAKLVRIVETYTGIDTTDVRPLSQPWMYF
ILLGCTILLLLVDAWTIFNAVAIS
>Mature_184_residues
MIENQDSETLVFKISPLIKLTLLSLYVALTVPLPFLSQATNAPVPPFILVIGLTIGAIALYGALAERVIVNGQGIQVSYP
AWVPDLFRKGWYLPWTEIKALKPRTTGQGGLVYYFLNNSEEGYLLPMRVVGFAKLVRIVETYTGIDTTDVRPLSQPWMYF
ILLGCTILLLLVDAWTIFNAVAIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20435; Mature: 20435

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENQDSETLVFKISPLIKLTLLSLYVALTVPLPFLSQATNAPVPPFILVIGLTIGAIAL
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
YGALAERVIVNGQGIQVSYPAWVPDLFRKGWYLPWTEIKALKPRTTGQGGLVYYFLNNSE
HHHHHHHHEECCCCEEEECCCCCHHHHHCCCCCCHHHHHEECCCCCCCCCEEEEEECCCC
EGYLLPMRVVGFAKLVRIVETYTGIDTTDVRPLSQPWMYFILLGCTILLLLVDAWTIFNA
CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAIS
HHCC
>Mature Secondary Structure
MIENQDSETLVFKISPLIKLTLLSLYVALTVPLPFLSQATNAPVPPFILVIGLTIGAIAL
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
YGALAERVIVNGQGIQVSYPAWVPDLFRKGWYLPWTEIKALKPRTTGQGGLVYYFLNNSE
HHHHHHHHEECCCCEEEECCCCCHHHHHCCCCCCHHHHHEECCCCCCCCCEEEEEECCCC
EGYLLPMRVVGFAKLVRIVETYTGIDTTDVRPLSQPWMYFILLGCTILLLLVDAWTIFNA
CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAIS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]