Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474521

Identifier: 113474521

GI number: 113474521

Start: 1102446

End: 1102814

Strand: Direct

Name: 113474521

Synonym: Tery_0672

Alternate gene names: NA

Gene position: 1102446-1102814 (Clockwise)

Preceding gene: 113474518

Following gene: 113474522

Centisome position: 14.22

GC content: 34.96

Gene sequence:

>369_bases
ATGGCACAAATTCTTGATCCCCTACCATCTAAAAGCTCCAATCCAATTATCTGTTGTTACATAAATGCCACAAGTCAAAT
CCAGATAGCTAAAATTAGTAATATACCTAATTGGTATTTTGAAAGAGTTGTATTTCCAGGTCAACGTTTAGTATTTGAAT
CAGTTATTGGTGCTTTAATGGAGGTTCACACAGGAGCATTGGCCAGCTCTATCTTGTCAGATACAATACCTTGCGATCGC
CTACAAATAAATGAAAGTCCTTATTCTTCAATTTGTGAAACTAAGAATTCTGTAGCAAGATCAGTCAATTTATCTCCAAG
ACTAACCTCTCCTTCAAAATCAAGACAAGTTTTGAGTAGAGTAGATTAA

Upstream 100 bases:

>100_bases
AACTTAAGTATTCAAAATTACAACTCATAGAGTTCAGTTAATGTTAAGCTATCTGAATAATTAAATAACTGTATAAACAA
AAAACTTTTGATAGATTAAT

Downstream 100 bases:

>100_bases
TTACCTTAAGCTCCCAAGAGTTAAATTAAAAACTATGAGGATAAATCAACTTAATTATAGTCTAAATATAAGCTTAAAAA
AGTTGATTTACTAGATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MAQILDPLPSKSSNPIICCYINATSQIQIAKISNIPNWYFERVVFPGQRLVFESVIGALMEVHTGALASSILSDTIPCDR
LQINESPYSSICETKNSVARSVNLSPRLTSPSKSRQVLSRVD

Sequences:

>Translated_122_residues
MAQILDPLPSKSSNPIICCYINATSQIQIAKISNIPNWYFERVVFPGQRLVFESVIGALMEVHTGALASSILSDTIPCDR
LQINESPYSSICETKNSVARSVNLSPRLTSPSKSRQVLSRVD
>Mature_121_residues
AQILDPLPSKSSNPIICCYINATSQIQIAKISNIPNWYFERVVFPGQRLVFESVIGALMEVHTGALASSILSDTIPCDRL
QINESPYSSICETKNSVARSVNLSPRLTSPSKSRQVLSRVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014964 [H]

Pfam domain/function: PF08865 DUF1830 [H]

EC number: NA

Molecular weight: Translated: 13425; Mature: 13293

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQILDPLPSKSSNPIICCYINATSQIQIAKISNIPNWYFERVVFPGQRLVFESVIGALM
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
EVHTGALASSILSDTIPCDRLQINESPYSSICETKNSVARSVNLSPRLTSPSKSRQVLSR
HHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VD
CC
>Mature Secondary Structure 
AQILDPLPSKSSNPIICCYINATSQIQIAKISNIPNWYFERVVFPGQRLVFESVIGALM
CCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
EVHTGALASSILSDTIPCDRLQINESPYSSICETKNSVARSVNLSPRLTSPSKSRQVLSR
HHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]