The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474503

Identifier: 113474503

GI number: 113474503

Start: 1064179

End: 1065519

Strand: Direct

Name: 113474503

Synonym: Tery_0652

Alternate gene names: NA

Gene position: 1064179-1065519 (Clockwise)

Preceding gene: 113474500

Following gene: 113474504

Centisome position: 13.73

GC content: 39.15

Gene sequence:

>1341_bases
ATGAACAAAATAGCTTATTTTGAATGTCCCACTGGTATTGCAGGCGATATGTGTCTGGGTGCTTTAGTCCATGTTGGTGT
TCCTCTAAACTATCTAATAGAAAAACTAAATCTGTTGGGTATTTCTCAAGAATATCAGTTAAGTGCTGAGAAAGTCCATC
GTAATGGTTTAGTTGCTACAAAATTTCATGTTAGACTTATTCATGCAAATCCTGAAGACGGGGAACCTCTGACTTTTGAT
CATCACCATGACCATCATCACACTCATAATTTAGAAAATAAATCTAGCACAAAAAAACATCATCATACTCATCACCGCCA
TTTGCCAGAAATTGAAGCATTAATCAAAAAAGCAGGGTTGCCCCAACGTGCTGAAGATTGGAGTTTAAAAGTGTTTCGTA
AGTTAGCAGAAGCAGAGGGGGCTGTACATGGTATTGCCCCAAAGCAAGTACATTTTCACGAAGTGGGGGCAACTGATGCA
ATTATTGATATTGTAGGAACTTGTTTGGGGTTAGATTGGTTGGACATTGACTTACTGTATTGTTCACCTCTGCCTATTGG
TGGAGGAACTGTTAAAGCAGCTCATGGTCGATTACCTGTACCTGTACCAGCAGTGCTCAAACTTTGGGAGTTGCATAATG
TTCCGATTTATAGTAATGGTTTGGAAAAAGAATTGTGTACTCCTACAGGTAGCGCGATCGCTTGTACTTTTGCTAGTAGT
TTTGGTCCACCACCGCCAATGTTTTTGGAACGAGTAGGTTTGGGAGCAGGTTCCCAGAATTTAGCTATTCCTAATATTCT
TCGCTTATGGATCGGTGAAGGAAAAGCTAGTACTCAAAATTTTCAAATTACAAAATCTGATGCTCCCACTTCTCAAGATA
TTCACCTAGAAACTGTGTCAGTGTTGGAAACTCAAATAGATGATTGTTCTCCTCAAACTATCGCTTATACTTTTGATGCT
CTGTTTGCTGCGGGAGCCTTGGATGTTTTTAGTCAGCCTGTAACTATGAAGAAATCTCGTTTGGGAGTTTTACTAACTGT
TATTTGTACACCAGAAAAGTTGTCTGCTTGTGAAGAAGTAATATTTCAAGAGACTACGACTTTGGGTATTCGTTGCTCTA
TTCAACAACGGAGTATTTTGAAGCGAGAAATTCATCAGGTGCAAACAGAATATGGAGCCATCCGACTAAAAGTAGCAAAG
AAGGGGGAGAAAATTGTGAATGTACAACCGGAATATGAAGATTGTGCTGCATTAGCTAGACAGGAAAATATGCCTTTGAT
AGAAGTACATAAAATGGTATTGCAGAGTTGGCAATTGCACTACTCAGAAGGTTTGAAATAA

Upstream 100 bases:

>100_bases
TAAGGATAAAGGCTCTCCTTATTATAAGAAGATTCTAGTATTTTTTTGCCTCCTAATTCAGTAGGAGTTACTCATAACTG
ATAACTAAGTTCCCTAATTT

Downstream 100 bases:

>100_bases
AATCCACCTGAGACCCTAGGGTTCCAGGTTAGAAGTAATAGTTAATCCCTGATTAGGTTTGAGGATTTATAAATTTCTGC
GCCCTGTTTACATAGTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNKIAYFECPTGIAGDMCLGALVHVGVPLNYLIEKLNLLGISQEYQLSAEKVHRNGLVATKFHVRLIHANPEDGEPLTFD
HHHDHHHTHNLENKSSTKKHHHTHHRHLPEIEALIKKAGLPQRAEDWSLKVFRKLAEAEGAVHGIAPKQVHFHEVGATDA
IIDIVGTCLGLDWLDIDLLYCSPLPIGGGTVKAAHGRLPVPVPAVLKLWELHNVPIYSNGLEKELCTPTGSAIACTFASS
FGPPPPMFLERVGLGAGSQNLAIPNILRLWIGEGKASTQNFQITKSDAPTSQDIHLETVSVLETQIDDCSPQTIAYTFDA
LFAAGALDVFSQPVTMKKSRLGVLLTVICTPEKLSACEEVIFQETTTLGIRCSIQQRSILKREIHQVQTEYGAIRLKVAK
KGEKIVNVQPEYEDCAALARQENMPLIEVHKMVLQSWQLHYSEGLK

Sequences:

>Translated_446_residues
MNKIAYFECPTGIAGDMCLGALVHVGVPLNYLIEKLNLLGISQEYQLSAEKVHRNGLVATKFHVRLIHANPEDGEPLTFD
HHHDHHHTHNLENKSSTKKHHHTHHRHLPEIEALIKKAGLPQRAEDWSLKVFRKLAEAEGAVHGIAPKQVHFHEVGATDA
IIDIVGTCLGLDWLDIDLLYCSPLPIGGGTVKAAHGRLPVPVPAVLKLWELHNVPIYSNGLEKELCTPTGSAIACTFASS
FGPPPPMFLERVGLGAGSQNLAIPNILRLWIGEGKASTQNFQITKSDAPTSQDIHLETVSVLETQIDDCSPQTIAYTFDA
LFAAGALDVFSQPVTMKKSRLGVLLTVICTPEKLSACEEVIFQETTTLGIRCSIQQRSILKREIHQVQTEYGAIRLKVAK
KGEKIVNVQPEYEDCAALARQENMPLIEVHKMVLQSWQLHYSEGLK
>Mature_446_residues
MNKIAYFECPTGIAGDMCLGALVHVGVPLNYLIEKLNLLGISQEYQLSAEKVHRNGLVATKFHVRLIHANPEDGEPLTFD
HHHDHHHTHNLENKSSTKKHHHTHHRHLPEIEALIKKAGLPQRAEDWSLKVFRKLAEAEGAVHGIAPKQVHFHEVGATDA
IIDIVGTCLGLDWLDIDLLYCSPLPIGGGTVKAAHGRLPVPVPAVLKLWELHNVPIYSNGLEKELCTPTGSAIACTFASS
FGPPPPMFLERVGLGAGSQNLAIPNILRLWIGEGKASTQNFQITKSDAPTSQDIHLETVSVLETQIDDCSPQTIAYTFDA
LFAAGALDVFSQPVTMKKSRLGVLLTVICTPEKLSACEEVIFQETTTLGIRCSIQQRSILKREIHQVQTEYGAIRLKVAK
KGEKIVNVQPEYEDCAALARQENMPLIEVHKMVLQSWQLHYSEGLK

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002822 [H]

Pfam domain/function: PF01969 DUF111 [H]

EC number: NA

Molecular weight: Translated: 49241; Mature: 49241

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIAYFECPTGIAGDMCLGALVHVGVPLNYLIEKLNLLGISQEYQLSAEKVHRNGLVAT
CCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
KFHVRLIHANPEDGEPLTFDHHHDHHHTHNLENKSSTKKHHHTHHRHLPEIEALIKKAGL
EEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCC
PQRAEDWSLKVFRKLAEAEGAVHGIAPKQVHFHEVGATDAIIDIVGTCLGLDWLDIDLLY
CCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEEE
CSPLPIGGGTVKAAHGRLPVPVPAVLKLWELHNVPIYSNGLEKELCTPTGSAIACTFASS
ECCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCCHHHCCCCCCEEEEEEHHC
FGPPPPMFLERVGLGAGSQNLAIPNILRLWIGEGKASTQNFQITKSDAPTSQDIHLETVS
CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEHHHHH
VLETQIDDCSPQTIAYTFDALFAAGALDVFSQPVTMKKSRLGVLLTVICTPEKLSACEEV
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECCHHHHHHHHH
IFQETTTLGIRCSIQQRSILKREIHQVQTEYGAIRLKVAKKGEKIVNVQPEYEDCAALAR
HHHHCCEEEEEEECHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCCHHHHHHHHH
QENMPLIEVHKMVLQSWQLHYSEGLK
HCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKIAYFECPTGIAGDMCLGALVHVGVPLNYLIEKLNLLGISQEYQLSAEKVHRNGLVAT
CCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
KFHVRLIHANPEDGEPLTFDHHHDHHHTHNLENKSSTKKHHHTHHRHLPEIEALIKKAGL
EEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCC
PQRAEDWSLKVFRKLAEAEGAVHGIAPKQVHFHEVGATDAIIDIVGTCLGLDWLDIDLLY
CCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEEE
CSPLPIGGGTVKAAHGRLPVPVPAVLKLWELHNVPIYSNGLEKELCTPTGSAIACTFASS
ECCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCCHHHCCCCCCEEEEEEHHC
FGPPPPMFLERVGLGAGSQNLAIPNILRLWIGEGKASTQNFQITKSDAPTSQDIHLETVS
CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEHHHHH
VLETQIDDCSPQTIAYTFDALFAAGALDVFSQPVTMKKSRLGVLLTVICTPEKLSACEEV
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECCHHHHHHHHH
IFQETTTLGIRCSIQQRSILKREIHQVQTEYGAIRLKVAKKGEKIVNVQPEYEDCAALAR
HHHHCCEEEEEEECHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCCHHHHHHHHH
QENMPLIEVHKMVLQSWQLHYSEGLK
HCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA