Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474504

Identifier: 113474504

GI number: 113474504

Start: 1066433

End: 1066786

Strand: Direct

Name: 113474504

Synonym: Tery_0653

Alternate gene names: NA

Gene position: 1066433-1066786 (Clockwise)

Preceding gene: 113474503

Following gene: 113474507

Centisome position: 13.76

GC content: 34.18

Gene sequence:

>354_bases
ATGAACATAATTATTGCTATATTGGGTATTAGTACACTCTTACTCTCTTTTACCCATGTTGCGAAAGCACAATTAAATAG
TCTTCCTCCTGAAGCAACTGTATCCGGAGACTCTCTAAAAACAGTAGAAGGTAGATCAATTACTAATGATAATTATCGCA
GATATATTGATGAATCAGAATCTAATGGAATTAAACCCTATGAACTGCGTCGTCAACAGGAAGATATAGAAGTTATACCA
GGGGTATCTATTCCTAAAAAACAGGATAAACCTAAATTAGGAAGTCCTTTCGAAGAAAGTGCTGTAGACGGGGAAAAATC
TGTAAAAGGATTCAAATTGAAATTAGGAATTTAG

Upstream 100 bases:

>100_bases
AAAAATATATTTGTAGACGTAGAAGAGGTTTTCCTAACCCTAGTATTTTTAGGCATTTACATACTAGAACAAAAATTATT
CACTTAAAATAGAATAAATC

Downstream 100 bases:

>100_bases
AAGTTGTTGATGCCTACAAAGTTTGGGAAATACCTTGGAAATTATAGATTTCAGAAAAAATGGCATATCTATTGAGGGGC
TAATAATAATCAGTTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNIIIAILGISTLLLSFTHVAKAQLNSLPPEATVSGDSLKTVEGRSITNDNYRRYIDESESNGIKPYELRRQQEDIEVIP
GVSIPKKQDKPKLGSPFEESAVDGEKSVKGFKLKLGI

Sequences:

>Translated_117_residues
MNIIIAILGISTLLLSFTHVAKAQLNSLPPEATVSGDSLKTVEGRSITNDNYRRYIDESESNGIKPYELRRQQEDIEVIP
GVSIPKKQDKPKLGSPFEESAVDGEKSVKGFKLKLGI
>Mature_117_residues
MNIIIAILGISTLLLSFTHVAKAQLNSLPPEATVSGDSLKTVEGRSITNDNYRRYIDESESNGIKPYELRRQQEDIEVIP
GVSIPKKQDKPKLGSPFEESAVDGEKSVKGFKLKLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12869; Mature: 12869

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIIAILGISTLLLSFTHVAKAQLNSLPPEATVSGDSLKTVEGRSITNDNYRRYIDESE
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCHHHHCCCCC
SNGIKPYELRRQQEDIEVIPGVSIPKKQDKPKLGSPFEESAVDGEKSVKGFKLKLGI
CCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure
MNIIIAILGISTLLLSFTHVAKAQLNSLPPEATVSGDSLKTVEGRSITNDNYRRYIDESE
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCHHHHCCCCC
SNGIKPYELRRQQEDIEVIPGVSIPKKQDKPKLGSPFEESAVDGEKSVKGFKLKLGI
CCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA