The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474488

Identifier: 113474488

GI number: 113474488

Start: 1035817

End: 1036140

Strand: Direct

Name: 113474488

Synonym: Tery_0635

Alternate gene names: NA

Gene position: 1035817-1036140 (Clockwise)

Preceding gene: 113474487

Following gene: 113474489

Centisome position: 13.37

GC content: 31.48

Gene sequence:

>324_bases
ATGGAAACTGAGGTTAATCTACTAAGTAATGATGATGTTTTGTCTACAGGTGCGAGTATTTTGATGTTTCAATGTACATT
TAAAGTTAGTGAATATATAACTATGATTTTAGCAAAACTAGAGTCGGAAAACCTATTTGAAGATGGGTTAGAATGTCAAT
TATTAAAACCTGGTTATTACTGGAGAAAAGGAAAGGTAAAACTTCGTTTAGAATTTCTGACAGAAACTTCTGATACTGTT
TCAAAAAAATGGTTGTCTCGAAGTGTTGTTAGTTCTATTAGTTATCCTGAAGAAGTTGTAGAAGATGTAGGAATGTGGAG
TTAA

Upstream 100 bases:

>100_bases
GTATACTGACGCCAAATGGTAGATTATGAGATGTACTCCTTATTCCCTTTTTTTTTAATTCTTACCTTATTTCACTCAAA
ATAAATTCTAGATAATTATT

Downstream 100 bases:

>100_bases
ATTTCAATAGATTATCAATGTTGAGTTAGTAGTTTTTATAGTGTTGCTCAAGTTACTGGAATACAGTTTTTTTCTTCTTT
TCTATTCCCTGCTTCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
METEVNLLSNDDVLSTGASILMFQCTFKVSEYITMILAKLESENLFEDGLECQLLKPGYYWRKGKVKLRLEFLTETSDTV
SKKWLSRSVVSSISYPEEVVEDVGMWS

Sequences:

>Translated_107_residues
METEVNLLSNDDVLSTGASILMFQCTFKVSEYITMILAKLESENLFEDGLECQLLKPGYYWRKGKVKLRLEFLTETSDTV
SKKWLSRSVVSSISYPEEVVEDVGMWS
>Mature_107_residues
METEVNLLSNDDVLSTGASILMFQCTFKVSEYITMILAKLESENLFEDGLECQLLKPGYYWRKGKVKLRLEFLTETSDTV
SKKWLSRSVVSSISYPEEVVEDVGMWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12256; Mature: 12256

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEVNLLSNDDVLSTGASILMFQCTFKVSEYITMILAKLESENLFEDGLECQLLKPGYY
CCCCCCCCCCCCCHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCE
WRKGKVKLRLEFLTETSDTVSKKWLSRSVVSSISYPEEVVEDVGMWS
EECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
METEVNLLSNDDVLSTGASILMFQCTFKVSEYITMILAKLESENLFEDGLECQLLKPGYY
CCCCCCCCCCCCCHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCE
WRKGKVKLRLEFLTETSDTVSKKWLSRSVVSSISYPEEVVEDVGMWS
EECCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA