Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474468

Identifier: 113474468

GI number: 113474468

Start: 990764

End: 992905

Strand: Direct

Name: 113474468

Synonym: Tery_0612

Alternate gene names: NA

Gene position: 990764-992905 (Clockwise)

Preceding gene: 113474466

Following gene: 113474469

Centisome position: 12.78

GC content: 38.98

Gene sequence:

>2142_bases
ATGTCATTAGAAAATTCACAAACAAAAAACCTGGAGGCAAGTTCTGATAGCTCCTCTGAAAATGGAGTAAACAGCTATAA
TAGTAATTCTCTAGTAGAAACAGAAGCGGTAAATACTACTTCAAAACCTTTAGAGGAAGAACAAAACGATAACTTAGAAG
TTGAACCCCAAAAAAATTCCCAAAAATTAATAGAATTTCAAGGAAGAAAAGACAAAAAAAAATATTGGGGATGGCAACTA
AAGTGGTGGAGTATTGCAGCTAGCTTTGGAATTACAGCTGGTGTAGCACTTCTGTGGTTACTGGTTATCCCTGCCGAACC
AAACTGCGAAAAAATTTCACCATTATCATCAGATGGCAAACGACTTTACTGCGCTAACAAAGCGGCCGAGTCACGAGATC
TAGAAGAGTTAGAAAAAGCTTTCAATTTAGTAGAAAGTTGGCCAGAAGAACACCCCCTCTATCAAATGGGTCAACAAATG
ACAGGAGAATGGACAAAGTTAATCATCTCCATTGCTTATCAAAAGATTAGAAAAGGGAACTTACAGGGAGCTCTAAATGC
AGTAGAGAAAATTCCGGAAGATAGTCCGGCTTACCCTAGGGTAGAAGAAGCAGTAACAGATTGGAAAAAACAATGGATAG
AAGGTCAATCTTTCTATGACAAAGCTACAGAAGCTATAAAGGCTATGAATTGGAATAAAGCTTCAGATTATTCCTTGACC
ATGTCAAAGCTAGATAATGTTTACTGGCAAACTAATAAGTATAGAGAATTATTAGAGCGCATTGTATTGGAAAAAAAGGC
TTGGCAAATCCTTAAAGATGCTCGTTATTTGATATACAGAGAAACAGTAGACGAATATGGAGAAGCGATCGCTTTAGCCA
ACAAAATAGACCCTAGTCTTTATATTCGAGCAGAAGCTGAGAAAAATATTCAACAGTGGGTTCGTACCTTAATCGAAATT
GCTACTGAATATATAGAAGAAAAAGATATAGAAGGGGCCATTACAGCTATCGAATATATTCCTTCAGGGCATAAACTGAA
AAAAGAAGCTAAAGACTTAATATTACTAGGCCATGCTCAAGCAGCAACTTGGAACAAATCTGAGGGAGAGTCTCAAATTG
CCAATATGGTAGATCTCATAGAAGGAAAAGCTGTAGCAGCTCAGATTACTTTAGATAGCCCATATTATACACAAGCTCAG
ACTCAAGCTAAACAACTCCAACAATATTTAGACAACTTAACTCGTATTCAGCTAGCTAAGGCGATCGCCAGCATTGGTCA
ACCACCAGCATTACAATTGGCCATAGACCAAGCTCAAATGGTTGGTCTGAAACAACCAGGACGAATCCAAGCTCAAACCT
TAATTGCTAAATGGCGCAAAGATATTCTCAAGATAAAAGACCGACCTTATGTAATTTTAGCTAAACAACTAGCTAAACAA
GAGACTATTGATAGTTATACAAAAGCTATTAAACAAGCTAGTTATGTTGCCTTGGATCGTCCACTGAGAATAGAGGCTCA
AACTCTAATAGCTGAGTGGAATAAACGAGTACAAATTATAGAAGATTCACCATTATTAGCAGAAGCTAGAGCTTTAGCAA
AAGAAGGAAACCTAGGTCAAGCTATTGATGTTGCATATCAGATAGAACAGGGTCGTGCTCTATATAGGGAAGCTCAGGAT
GAAATTTATAAATGGACAACAGAGCTACAAATTGCCCAAGATCAACCAATTCTTGATCAAGCTTATAGCTTGGCCAAGCA
AGGTAGTCTGACTGCTGCCATTAACACAGCTTATAAAATTGGCTATGGACGTACTTTGTATTATGAAGCTCAAGATGCTA
TATCTCGTTGGGAGTCTGAACTAGATGCGATACGGGAATCACAAAGAGCTGAGCAAGCTCGCAGAGAGCAACAATACCAA
CTAAGGCAGGAGCAACAATATTATTCCCCTGCTCCAAGTACCCAATATTATTCACCAGCTCCACAGAGGTCTTATTCCCC
TGCCTCTAGTCCTCAATATTATTCTCCTGCCCCGAGTCCCCAATATTATTCCCCTGCTCCACAGAGGTCTTATTATTCTA
CCCCAGACCCATCTCCAGCTCCAGCCTCCAATAGGTCAGATGCCTATCTACTTCAAGAATAA

Upstream 100 bases:

>100_bases
TTAAAAATACTCTGGGTGATGGAAAAGGCTAAAAAATTTATTTCAGCAAATTATCCTCACCTGCTTAAAAATTATTACCA
TTTGCAGAATAAATTTCCTT

Downstream 100 bases:

>100_bases
TTAACTATTAAGATTGAAGATTTAATCAAGATATTAAAGAAACTTTCAGTTTAATTTTTACTGGTTATTATAATCTTAAA
TATCTCAAGCAAAAACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQL
KWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQM
TGEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT
MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEI
ATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQ
TQAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ
ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQD
EIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQ
LRQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE

Sequences:

>Translated_713_residues
MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQL
KWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQM
TGEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT
MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEI
ATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQ
TQAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ
ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQD
EIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQ
LRQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE
>Mature_712_residues
SLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQLK
WWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMT
GEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLTM
SKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEIA
TEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQT
QAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQE
TIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQDE
IYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQL
RQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81085; Mature: 80954

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCC
QKLIEFQGRKDKKKYWGWQLKWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGK
HHHHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMTGEWTKLIISIAYQKIRKGN
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEE
MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YIRAEAEKNIQQWVRTLIEIATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQ
EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCEEEEECCC
AATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQTQAKQLQQYLDNLTRIQLAK
CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ
HHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCC
AIDVAYQIEQGRALYREAQDEIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEHHHHEEE
GYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQLRQEQQYYSPAPSTQYYSPA
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCC
QKLIEFQGRKDKKKYWGWQLKWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGK
HHHHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMTGEWTKLIISIAYQKIRKGN
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEE
MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YIRAEAEKNIQQWVRTLIEIATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQ
EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCEEEEECCC
AATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQTQAKQLQQYLDNLTRIQLAK
CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ
HHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCC
AIDVAYQIEQGRALYREAQDEIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEHHHHEEE
GYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQLRQEQQYYSPAPSTQYYSPA
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA