Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is uvrY [C]

Identifier: 113474469

GI number: 113474469

Start: 993008

End: 994957

Strand: Direct

Name: uvrY [C]

Synonym: Tery_0613

Alternate gene names: 113474469

Gene position: 993008-994957 (Clockwise)

Preceding gene: 113474468

Following gene: 113474470

Centisome position: 12.81

GC content: 30.36

Gene sequence:

>1950_bases
ATGAATAGTGAATCAGCATTAAAATTGCTGCTCATCGATAATGACCCTATCTTTCGGATGGGGTTAAAATTTTCCTGTGA
GCAGTTTTCGGATATAGAAATAGTAGTTGAGACAGAAGTAGGCTCAAAAGCATTAAAAATTATTCACTCTTTGAACACAC
AAGAGAATAATTTTTTGGTAATTCTAGACATAGAAACCAATAATTTGCTTCCTCAAACTACAGAGAAAATTACAATTTCT
GGAATTGACTTTTGTCAACAACTTAAAATTTCGTACCCAGAATTACCAATATTATTATTAACATATCTACAAGATAACCT
ATTATTGACATTAGTAAAAAATTTAGGTGTTAATGGTTATTGTCCAAAAGGAATCAGTATTTCTGAGTTAATAATTATTA
TTAGAAAAATAGGGTCCGGCCAATATCATTGGCAAAATATTATTGGGGTTGAAGCTATAGAAGAAAACTCTAATAAACTA
GCAAATTTAAATTCAAGAGTGCAAATAAAAAAAATTTTTAATAATATTTTTGGTAACATCTGCAACTCGGGGATAAAACA
AATAGATTCTGCTCTCTCAGAAGTAACATCTCAACTGAATGAAAGAGAAAAAAAATTAGATATCAACAATTTAACTTCTC
TACTCAATATGGCAATAACTTCTGGGCAACGCCGAGAATTGCTAACAGCTAGATGGATACTAATTCAATTTTCAAGTCAG
TCTTTTAATACTTATAATAAACAGGAGCAAATAGATTTAAATGAAGATAATTTTGACTACTCAAAAACACAAAATATTAC
CGATTTACAAACTAATAAGCTCATTGGTTTAGTTAACAATAATCGGGAAACTTTTCTGAATACAAATGCAGAAGTTATTT
CCCAAACTTCCACTGATAAAAGCAATGTACAAACAGCAGTATTTGAAGCAACAGTAGCTAAATTAAATTCTAATTTAATC
AACTTCAGTGGGTTACCTATGGAAATTGATATATTGCGAGGTTCTAAGAAAAAAGAACTAATTTATATAGCTTTATGTAA
GTTTGAAGATCTTCTTGATGAACTACGTAGTGCTTCTACTCTGAAGGAAGAAATCATAAAAAAGAGATATGATATTGTAC
ATAATTTGTGGGAATTAACGAGCCAGTTTTTTTGGGATGAATACCATAAATTAGAAATCAGTAATAGCATAGAATTAGTC
AATTGTTTTTCAGAAAAAATTAGAGTAGAAGTGATGCCAGTCTTATTAAACGAGGCGGATAATGTACATAAGTTTATTCT
TGATAAAATTCCTTTAGTTGAAGAATTAATAGCTTACTTATTATTTGAAGTTCCTTTGTTAGTTGATAATGTATCTTTTG
CCGTAGGTACTCCTGAAGCTATGGAACGTTCTGAAGCTTTACTGCAAAATTTATTAATTTCAGTTGCTAACAGTGTTATC
CAACCTTTATTAAATAATTTTGCCCATGTAGAGGAAATTAAAAAATATTTTTATGATCAACAATTATTATCCACACGAGA
TATTGAAAAGTTCAGAAATCGCTTATCTTGGAAATATCGCATAGAACAATATATAGAGGAACCAAAAGCAATTTTTGAGA
GTAACTTTTTCTTATTTGTGTTAAATGAACGTGGCATTAAAAGAATATCTATTTATTCACCCCGTAGACATGAATTAGGA
AAACTATCAGGGATTCCATTAACAGTAACATTACTTTTAGAAACTCGTGATGCAATAGCTCCTGGTATTAGAGGAACTAT
TTCTTTTATTGGCAGTGGAGTTGTGTATTTATTAACTCAAGTAATTGGGCGTGGTATAGGTTTAATTGGAAGAGGTATTA
TTCAGGGCGTGGGTAGTTCTTTTCAAGATGCTAGATTTGGTAAAAATAATAATATGGGACAAACAAGAAGAAATCATGAA
CAAAGCAGAAGGCAGAAAGGGAGTATCTAG

Upstream 100 bases:

>100_bases
AACTATTAAGATTGAAGATTTAATCAAGATATTAAAGAAACTTTCAGTTTAATTTTTACTGGTTATTATAATCTTAAATA
TCTCAAGCAAAAACAAATTT

Downstream 100 bases:

>100_bases
GGTTATAAAGTCATGCATTTATATATTCATGTATTAATCTATGACTAAGTTTAAGCTTGAAAATTTGTTAGCCTATCAAT
GTTTCTTACTTGTCGACTTT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS
GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL
ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ
SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI
NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV
NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI
QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG
KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE
QSRRQKGSI

Sequences:

>Translated_649_residues
MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS
GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL
ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ
SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI
NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV
NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI
QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG
KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE
QSRRQKGSI
>Mature_649_residues
MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS
GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL
ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ
SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI
NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV
NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI
QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG
KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE
QSRRQKGSI

Specific function: Member Of The Two-Component Regulatory System Uvry/Bara Involved In The Regulation Of Carbon Metabolism Via The Csra/Csrb Regulatory System. Uvry Activates The Transcription Of The Untranslated Csrb RNA And Of Bara, In An Autoregulatory Loop. Mediates The

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR016837
- InterPro:   IPR022552 [H]

Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 73909; Mature: 73909

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLV
CCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEE
ILDIETNNLLPQTTEKITISGIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGY
EEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
CPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKLANLNSRVQIKKIFNNIFGNI
CCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
CNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCC
SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCCCH
SNVQTAVFEATVAKLNSNLINFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSAST
HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
LKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELVNCFSEKIRVEVMPVLLNEAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHEEEHHHHCCCC
NVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE
LNERGIKRISIYSPRRHELGKLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQ
ECCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEECHHHHCCCCHHHHHHHHCCHHHHHHH
VIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHEQSRRQKGSI
HHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLV
CCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEE
ILDIETNNLLPQTTEKITISGIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGY
EEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
CPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKLANLNSRVQIKKIFNNIFGNI
CCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
CNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCC
SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCCCH
SNVQTAVFEATVAKLNSNLINFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSAST
HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
LKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELVNCFSEKIRVEVMPVLLNEAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHEEEHHHHCCCC
NVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE
LNERGIKRISIYSPRRHELGKLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQ
ECCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEECHHHHCCCCHHHHHHHHCCHHHHHHH
VIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHEQSRRQKGSI
HHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]