| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is uvrY [C]
Identifier: 113474469
GI number: 113474469
Start: 993008
End: 994957
Strand: Direct
Name: uvrY [C]
Synonym: Tery_0613
Alternate gene names: 113474469
Gene position: 993008-994957 (Clockwise)
Preceding gene: 113474468
Following gene: 113474470
Centisome position: 12.81
GC content: 30.36
Gene sequence:
>1950_bases ATGAATAGTGAATCAGCATTAAAATTGCTGCTCATCGATAATGACCCTATCTTTCGGATGGGGTTAAAATTTTCCTGTGA GCAGTTTTCGGATATAGAAATAGTAGTTGAGACAGAAGTAGGCTCAAAAGCATTAAAAATTATTCACTCTTTGAACACAC AAGAGAATAATTTTTTGGTAATTCTAGACATAGAAACCAATAATTTGCTTCCTCAAACTACAGAGAAAATTACAATTTCT GGAATTGACTTTTGTCAACAACTTAAAATTTCGTACCCAGAATTACCAATATTATTATTAACATATCTACAAGATAACCT ATTATTGACATTAGTAAAAAATTTAGGTGTTAATGGTTATTGTCCAAAAGGAATCAGTATTTCTGAGTTAATAATTATTA TTAGAAAAATAGGGTCCGGCCAATATCATTGGCAAAATATTATTGGGGTTGAAGCTATAGAAGAAAACTCTAATAAACTA GCAAATTTAAATTCAAGAGTGCAAATAAAAAAAATTTTTAATAATATTTTTGGTAACATCTGCAACTCGGGGATAAAACA AATAGATTCTGCTCTCTCAGAAGTAACATCTCAACTGAATGAAAGAGAAAAAAAATTAGATATCAACAATTTAACTTCTC TACTCAATATGGCAATAACTTCTGGGCAACGCCGAGAATTGCTAACAGCTAGATGGATACTAATTCAATTTTCAAGTCAG TCTTTTAATACTTATAATAAACAGGAGCAAATAGATTTAAATGAAGATAATTTTGACTACTCAAAAACACAAAATATTAC CGATTTACAAACTAATAAGCTCATTGGTTTAGTTAACAATAATCGGGAAACTTTTCTGAATACAAATGCAGAAGTTATTT CCCAAACTTCCACTGATAAAAGCAATGTACAAACAGCAGTATTTGAAGCAACAGTAGCTAAATTAAATTCTAATTTAATC AACTTCAGTGGGTTACCTATGGAAATTGATATATTGCGAGGTTCTAAGAAAAAAGAACTAATTTATATAGCTTTATGTAA GTTTGAAGATCTTCTTGATGAACTACGTAGTGCTTCTACTCTGAAGGAAGAAATCATAAAAAAGAGATATGATATTGTAC ATAATTTGTGGGAATTAACGAGCCAGTTTTTTTGGGATGAATACCATAAATTAGAAATCAGTAATAGCATAGAATTAGTC AATTGTTTTTCAGAAAAAATTAGAGTAGAAGTGATGCCAGTCTTATTAAACGAGGCGGATAATGTACATAAGTTTATTCT TGATAAAATTCCTTTAGTTGAAGAATTAATAGCTTACTTATTATTTGAAGTTCCTTTGTTAGTTGATAATGTATCTTTTG CCGTAGGTACTCCTGAAGCTATGGAACGTTCTGAAGCTTTACTGCAAAATTTATTAATTTCAGTTGCTAACAGTGTTATC CAACCTTTATTAAATAATTTTGCCCATGTAGAGGAAATTAAAAAATATTTTTATGATCAACAATTATTATCCACACGAGA TATTGAAAAGTTCAGAAATCGCTTATCTTGGAAATATCGCATAGAACAATATATAGAGGAACCAAAAGCAATTTTTGAGA GTAACTTTTTCTTATTTGTGTTAAATGAACGTGGCATTAAAAGAATATCTATTTATTCACCCCGTAGACATGAATTAGGA AAACTATCAGGGATTCCATTAACAGTAACATTACTTTTAGAAACTCGTGATGCAATAGCTCCTGGTATTAGAGGAACTAT TTCTTTTATTGGCAGTGGAGTTGTGTATTTATTAACTCAAGTAATTGGGCGTGGTATAGGTTTAATTGGAAGAGGTATTA TTCAGGGCGTGGGTAGTTCTTTTCAAGATGCTAGATTTGGTAAAAATAATAATATGGGACAAACAAGAAGAAATCATGAA CAAAGCAGAAGGCAGAAAGGGAGTATCTAG
Upstream 100 bases:
>100_bases AACTATTAAGATTGAAGATTTAATCAAGATATTAAAGAAACTTTCAGTTTAATTTTTACTGGTTATTATAATCTTAAATA TCTCAAGCAAAAACAAATTT
Downstream 100 bases:
>100_bases GGTTATAAAGTCATGCATTTATATATTCATGTATTAATCTATGACTAAGTTTAAGCTTGAAAATTTGTTAGCCTATCAAT GTTTCTTACTTGTCGACTTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE QSRRQKGSI
Sequences:
>Translated_649_residues MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE QSRRQKGSI >Mature_649_residues MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLVILDIETNNLLPQTTEKITIS GIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGYCPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKL ANLNSRVQIKKIFNNIFGNICNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDKSNVQTAVFEATVAKLNSNLI NFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSASTLKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELV NCFSEKIRVEVMPVLLNEADNVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFVLNERGIKRISIYSPRRHELG KLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQVIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHE QSRRQKGSI
Specific function: Member Of The Two-Component Regulatory System Uvry/Bara Involved In The Regulation Of Carbon Metabolism Via The Csra/Csrb Regulatory System. Uvry Activates The Transcription Of The Untranslated Csrb RNA And Of Bara, In An Autoregulatory Loop. Mediates The
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 73909; Mature: 73909
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLV CCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEE ILDIETNNLLPQTTEKITISGIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGY EEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC CPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKLANLNSRVQIKKIFNNIFGNI CCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH CNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCC SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCCCH SNVQTAVFEATVAKLNSNLINFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSAST HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH LKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELVNCFSEKIRVEVMPVLLNEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHEEEHHHHCCCC NVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE LNERGIKRISIYSPRRHELGKLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQ ECCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEECHHHHCCCCHHHHHHHHCCHHHHHHH VIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHEQSRRQKGSI HHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNSESALKLLLIDNDPIFRMGLKFSCEQFSDIEIVVETEVGSKALKIIHSLNTQENNFLV CCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEE ILDIETNNLLPQTTEKITISGIDFCQQLKISYPELPILLLTYLQDNLLLTLVKNLGVNGY EEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC CPKGISISELIIIIRKIGSGQYHWQNIIGVEAIEENSNKLANLNSRVQIKKIFNNIFGNI CCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH CNSGIKQIDSALSEVTSQLNEREKKLDINNLTSLLNMAITSGQRRELLTARWILIQFSSQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCC SFNTYNKQEQIDLNEDNFDYSKTQNITDLQTNKLIGLVNNNRETFLNTNAEVISQTSTDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCCCH SNVQTAVFEATVAKLNSNLINFSGLPMEIDILRGSKKKELIYIALCKFEDLLDELRSAST HHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH LKEEIIKKRYDIVHNLWELTSQFFWDEYHKLEISNSIELVNCFSEKIRVEVMPVLLNEAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHEEEHHHHCCCC NVHKFILDKIPLVEELIAYLLFEVPLLVDNVSFAVGTPEAMERSEALLQNLLISVANSVI HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH QPLLNNFAHVEEIKKYFYDQQLLSTRDIEKFRNRLSWKYRIEQYIEEPKAIFESNFFLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE LNERGIKRISIYSPRRHELGKLSGIPLTVTLLLETRDAIAPGIRGTISFIGSGVVYLLTQ ECCCCCEEEEECCCCHHHCCCCCCCCEEEEEEEECHHHHCCCCHHHHHHHHCCHHHHHHH VIGRGIGLIGRGIIQGVGSSFQDARFGKNNNMGQTRRNHEQSRRQKGSI HHHCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]