Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474454

Identifier: 113474454

GI number: 113474454

Start: 961521

End: 963302

Strand: Direct

Name: 113474454

Synonym: Tery_0598

Alternate gene names: NA

Gene position: 961521-963302 (Clockwise)

Preceding gene: 113474453

Following gene: 113474455

Centisome position: 12.41

GC content: 30.13

Gene sequence:

>1782_bases
ATGGCAACTATTGAATCTAAAGGCATGAATTTAGAAAAGTTATTTGATGAATTTTATGTTATTCCTGATTACCAGCGCGA
ATATGTTTGGACACAAAAAGAAGTCAATGAATTTATTCAAGACATCTATGAAGAATTTTCTGAACAAACTCAAAACTCTT
ACCCTGAGTATTTTATTGGCAGTATAATTGTTTGTGGTCGCGGGGAAAAATTTTATGAAATAATTGATGGCCAGCAACGA
ATTACTACTGCTTACCTTGTACTATGTGCAATTCGGGATTATCTATTAACTATTAATCCTAATGAACCTATTGAAGCATT
AAAAAATAAGATTGCTGCTTTGTATACGGATAACTGGGGTAATGACCAGTTTAGACACAAAGTAGAACTACAATATCAGG
AAAGTCGAGGAATACTAGAAAATATAGCTCTACAAGCAAGTGTAGAGACTCTTAGTCCAACTCGCTCTGTTAAAAATATT
CAGAATGCTTATACTGAAATTAGAAGTTTTCTTTACCAATATTTTCAAGTAGATGAACTTGTTGTTTTTAATATCAAAAA
GTTTTACGCATATTTTCTTAAAAATGTTAAGTTAATTCGAGTCAAAACAGCTAGTGTTTCTCATGCTTTGAAAATATATT
CAACTCTAAATCATCGTGGTTTAGCCCTAGATGATATGGATTTACTCAAAAATTTAATTTTTACTAAAGCTAAATCAACA
GATTATGATCAAATCAAAGTAAAATGGAAAACAATGATAGACTTGCTTTATAATCATCAAGAAAAACCCATGCGTTTTTT
GCGCTATTTTATATTAGCCAAATACGCAAAAGATGGGAACTATATTTTGGAAAAAGAAGTCTATGATTGGTTCCTAAATA
ATGAACATATTTGTAGATATAAGACTGAACCGATTCAGTTTGTGAATAATTTACTGAGCTCGGCTCAAGCTTATGTAGCA
TTTTTAATAGGTAATAATGTTGATGGTACTGTTAATCGGTATTTGGTAAATATTAGAAATCTTAGTATAAATGTTAGGCA
GCATTTAATATTACTTTTAGCTGTTGATAAGTTGCCTAAAGCTTGTTTTGTTGATCTCTGTAGACAGATAGAGAATTTAT
TATTTTTGGCAATGTTAACTAGCGATCGCCATAAAAAAGCATTTGATGGCATGATAATTAAGTGGGCAAGTGAGTTACGT
ACAATTAGTTCACAAGAGGATTATGATATTTTTATTGCTCAGGAAATTATTCCTAGCAAACAGGGAGTAGCTGATAAATT
TGAAAATACGTTCTATCGACTGAATAAATTATCATTACAGCTATATCAAATTCGATATATTTTGGCAAAGATAACACAAT
ATATAGATGAAATGGCCTGGGGAACTGTGGGAGGAATTGATGATTTAAGAAACTATGTTTTTAAATTAGAAGTAGAACAA
ATTTTATCAGAAAACCCTACAAAAGAAGTAGTTTTTGATTTTGATAAACCTACTGAAATAGTAAACTATAGTCAACGTTT
AGGAAATATGACTTTGTTAGAAAGTTCTATTAAATCTGCTATTTTAAATGCTAGTTTTACTGAGAAAAAATTAGGTTATA
CAAAATCTAGATTTTTGTTAACTAGAACTATTGCTGAAGAAATTTCGGTGGGAAACAATACAACTATTAATTTGGCTGTC
AAGGATTTAAAGACATTTGAAAAATGGGATTCTCAAGCAATAGAAACTCGTCAAGAAATTTTAACTCAATTAGCTAAAAA
AGTTTGGGATGTTCCTGAGTAA

Upstream 100 bases:

>100_bases
TGAAAAAAAATTGAGGGAATTGAGATAAATTGATATGAGAAAAATATTTTTATTCTGGATAATTAATGAGACTTGATACT
AAAGCTATTGAGGTAATTAT

Downstream 100 bases:

>100_bases
TCTCCAACTTATTTTATGAAAAACTCTTTATAGTATGGTTTAATTAGCAAAGGTCTACTATGCTACTTTATCTAAAATCT
ACAAAATAACTAGGATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MATIESKGMNLEKLFDEFYVIPDYQREYVWTQKEVNEFIQDIYEEFSEQTQNSYPEYFIGSIIVCGRGEKFYEIIDGQQR
ITTAYLVLCAIRDYLLTINPNEPIEALKNKIAALYTDNWGNDQFRHKVELQYQESRGILENIALQASVETLSPTRSVKNI
QNAYTEIRSFLYQYFQVDELVVFNIKKFYAYFLKNVKLIRVKTASVSHALKIYSTLNHRGLALDDMDLLKNLIFTKAKST
DYDQIKVKWKTMIDLLYNHQEKPMRFLRYFILAKYAKDGNYILEKEVYDWFLNNEHICRYKTEPIQFVNNLLSSAQAYVA
FLIGNNVDGTVNRYLVNIRNLSINVRQHLILLLAVDKLPKACFVDLCRQIENLLFLAMLTSDRHKKAFDGMIIKWASELR
TISSQEDYDIFIAQEIIPSKQGVADKFENTFYRLNKLSLQLYQIRYILAKITQYIDEMAWGTVGGIDDLRNYVFKLEVEQ
ILSENPTKEVVFDFDKPTEIVNYSQRLGNMTLLESSIKSAILNASFTEKKLGYTKSRFLLTRTIAEEISVGNNTTINLAV
KDLKTFEKWDSQAIETRQEILTQLAKKVWDVPE

Sequences:

>Translated_593_residues
MATIESKGMNLEKLFDEFYVIPDYQREYVWTQKEVNEFIQDIYEEFSEQTQNSYPEYFIGSIIVCGRGEKFYEIIDGQQR
ITTAYLVLCAIRDYLLTINPNEPIEALKNKIAALYTDNWGNDQFRHKVELQYQESRGILENIALQASVETLSPTRSVKNI
QNAYTEIRSFLYQYFQVDELVVFNIKKFYAYFLKNVKLIRVKTASVSHALKIYSTLNHRGLALDDMDLLKNLIFTKAKST
DYDQIKVKWKTMIDLLYNHQEKPMRFLRYFILAKYAKDGNYILEKEVYDWFLNNEHICRYKTEPIQFVNNLLSSAQAYVA
FLIGNNVDGTVNRYLVNIRNLSINVRQHLILLLAVDKLPKACFVDLCRQIENLLFLAMLTSDRHKKAFDGMIIKWASELR
TISSQEDYDIFIAQEIIPSKQGVADKFENTFYRLNKLSLQLYQIRYILAKITQYIDEMAWGTVGGIDDLRNYVFKLEVEQ
ILSENPTKEVVFDFDKPTEIVNYSQRLGNMTLLESSIKSAILNASFTEKKLGYTKSRFLLTRTIAEEISVGNNTTINLAV
KDLKTFEKWDSQAIETRQEILTQLAKKVWDVPE
>Mature_592_residues
ATIESKGMNLEKLFDEFYVIPDYQREYVWTQKEVNEFIQDIYEEFSEQTQNSYPEYFIGSIIVCGRGEKFYEIIDGQQRI
TTAYLVLCAIRDYLLTINPNEPIEALKNKIAALYTDNWGNDQFRHKVELQYQESRGILENIALQASVETLSPTRSVKNIQ
NAYTEIRSFLYQYFQVDELVVFNIKKFYAYFLKNVKLIRVKTASVSHALKIYSTLNHRGLALDDMDLLKNLIFTKAKSTD
YDQIKVKWKTMIDLLYNHQEKPMRFLRYFILAKYAKDGNYILEKEVYDWFLNNEHICRYKTEPIQFVNNLLSSAQAYVAF
LIGNNVDGTVNRYLVNIRNLSINVRQHLILLLAVDKLPKACFVDLCRQIENLLFLAMLTSDRHKKAFDGMIIKWASELRT
ISSQEDYDIFIAQEIIPSKQGVADKFENTFYRLNKLSLQLYQIRYILAKITQYIDEMAWGTVGGIDDLRNYVFKLEVEQI
LSENPTKEVVFDFDKPTEIVNYSQRLGNMTLLESSIKSAILNASFTEKKLGYTKSRFLLTRTIAEEISVGNNTTINLAVK
DLKTFEKWDSQAIETRQEILTQLAKKVWDVPE

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69383; Mature: 69251

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIESKGMNLEKLFDEFYVIPDYQREYVWTQKEVNEFIQDIYEEFSEQTQNSYPEYFIG
CCCCCCCCCCHHHHHHHHEECCCCCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
SIIVCGRGEKFYEIIDGQQRITTAYLVLCAIRDYLLTINPNEPIEALKNKIAALYTDNWG
CEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHEEEEECCCC
NDQFRHKVELQYQESRGILENIALQASVETLSPTRSVKNIQNAYTEIRSFLYQYFQVDEL
CCCCEEEEEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFNIKKFYAYFLKNVKLIRVKTASVSHALKIYSTLNHRGLALDDMDLLKNLIFTKAKST
HHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
DYDQIKVKWKTMIDLLYNHQEKPMRFLRYFILAKYAKDGNYILEKEVYDWFLNNEHICRY
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEE
KTEPIQFVNNLLSSAQAYVAFLIGNNVDGTVNRYLVNIRNLSINVRQHLILLLAVDKLPK
CCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHEEEEECCEEEHHHHHHHHHHHHHCCH
ACFVDLCRQIENLLFLAMLTSDRHKKAFDGMIIKWASELRTISSQEDYDIFIAQEIIPSK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEHHHCCCC
QGVADKFENTFYRLNKLSLQLYQIRYILAKITQYIDEMAWGTVGGIDDLRNYVFKLEVEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ILSENPTKEVVFDFDKPTEIVNYSQRLGNMTLLESSIKSAILNASFTEKKLGYTKSRFLL
HHCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH
TRTIAEEISVGNNTTINLAVKDLKTFEKWDSQAIETRQEILTQLAKKVWDVPE
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATIESKGMNLEKLFDEFYVIPDYQREYVWTQKEVNEFIQDIYEEFSEQTQNSYPEYFIG
CCCCCCCCCHHHHHHHHEECCCCCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
SIIVCGRGEKFYEIIDGQQRITTAYLVLCAIRDYLLTINPNEPIEALKNKIAALYTDNWG
CEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHEEEEECCCC
NDQFRHKVELQYQESRGILENIALQASVETLSPTRSVKNIQNAYTEIRSFLYQYFQVDEL
CCCCEEEEEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFNIKKFYAYFLKNVKLIRVKTASVSHALKIYSTLNHRGLALDDMDLLKNLIFTKAKST
HHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
DYDQIKVKWKTMIDLLYNHQEKPMRFLRYFILAKYAKDGNYILEKEVYDWFLNNEHICRY
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEE
KTEPIQFVNNLLSSAQAYVAFLIGNNVDGTVNRYLVNIRNLSINVRQHLILLLAVDKLPK
CCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHEEEEECCEEEHHHHHHHHHHHHHCCH
ACFVDLCRQIENLLFLAMLTSDRHKKAFDGMIIKWASELRTISSQEDYDIFIAQEIIPSK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEHHHCCCC
QGVADKFENTFYRLNKLSLQLYQIRYILAKITQYIDEMAWGTVGGIDDLRNYVFKLEVEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ILSENPTKEVVFDFDKPTEIVNYSQRLGNMTLLESSIKSAILNASFTEKKLGYTKSRFLL
HHCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH
TRTIAEEISVGNNTTINLAVKDLKTFEKWDSQAIETRQEILTQLAKKVWDVPE
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA