The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474347

Identifier: 113474347

GI number: 113474347

Start: 758513

End: 759103

Strand: Reverse

Name: 113474347

Synonym: Tery_0479

Alternate gene names: NA

Gene position: 759103-758513 (Counterclockwise)

Preceding gene: 113474349

Following gene: 113474338

Centisome position: 9.79

GC content: 34.01

Gene sequence:

>591_bases
ATGATTTGTAAATTTACTGCTTCACAATCAGTAGATATTCCTGTAGTAGAACAAAAAGTTCCTATTCAACATTATCTTCG
TCAACCAAAGCGCTTAGTTAATGCTTTAGTTGACCCAACAAGATTAGAGCAATTAGATCAAAATTGTTTCCGCCTAAAAA
TGCGTCCACTACACTTTATGATGTTAAGCATTCAACCAACTGTAGATATGCGCTTGTGGTCTAGTACTAAAGGCAAAATT
TACTTAAAGTCAGACAGATGTGAAATTCGTGGTGTAGAGTATATAAACCAACGCTTTAACCTGAATCTGGTTGGTATCCT
TGATACCCTAGAATTGAAAGGAGTTACTCATCTCAAAGGTCAAGCTGATTTAGAAGTTAAAGTAGAATTACCCCCTCCAT
TATTGTTGACACCATTACCAGTCTTAGAAACAACTGGTAATAGTTTACTCAAAAGTGTATTAATGACAATCAAACAAAGA
TTAACCCATCAATTATTACTAGATTATTATAAATGGGCTAATGATGAAACCCAGGACTTAATCAAGAACAAAAACTATCC
TATTTTATCTCCTAGTAGCCAAGGGATATAA

Upstream 100 bases:

>100_bases
AAAATTAATGAAATTAACAAACTTTAATGTTAATTAATATTATTTCAATGTTAATTAATATTATATTTTAGCTATCAGCT
ATTGATTTTTTTTTAAAATT

Downstream 100 bases:

>100_bases
TTCATAAGTTTGATGTATTAGCATTTATACTTTTCTTCAGAGCTCACGGGATCTACATAAGAAATTGCCAACAATGTTAC
AGTTTAACAAACAGTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MICKFTASQSVDIPVVEQKVPIQHYLRQPKRLVNALVDPTRLEQLDQNCFRLKMRPLHFMMLSIQPTVDMRLWSSTKGKI
YLKSDRCEIRGVEYINQRFNLNLVGILDTLELKGVTHLKGQADLEVKVELPPPLLLTPLPVLETTGNSLLKSVLMTIKQR
LTHQLLLDYYKWANDETQDLIKNKNYPILSPSSQGI

Sequences:

>Translated_196_residues
MICKFTASQSVDIPVVEQKVPIQHYLRQPKRLVNALVDPTRLEQLDQNCFRLKMRPLHFMMLSIQPTVDMRLWSSTKGKI
YLKSDRCEIRGVEYINQRFNLNLVGILDTLELKGVTHLKGQADLEVKVELPPPLLLTPLPVLETTGNSLLKSVLMTIKQR
LTHQLLLDYYKWANDETQDLIKNKNYPILSPSSQGI
>Mature_196_residues
MICKFTASQSVDIPVVEQKVPIQHYLRQPKRLVNALVDPTRLEQLDQNCFRLKMRPLHFMMLSIQPTVDMRLWSSTKGKI
YLKSDRCEIRGVEYINQRFNLNLVGILDTLELKGVTHLKGQADLEVKVELPPPLLLTPLPVLETTGNSLLKSVLMTIKQR
LTHQLLLDYYKWANDETQDLIKNKNYPILSPSSQGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018971 [H]

Pfam domain/function: PF09366 DUF1997 [H]

EC number: NA

Molecular weight: Translated: 22578; Mature: 22578

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICKFTASQSVDIPVVEQKVPIQHYLRQPKRLVNALVDPTRLEQLDQNCFRLKMRPLHFM
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEE
MLSIQPTVDMRLWSSTKGKIYLKSDRCEIRGVEYINQRFNLNLVGILDTLELKGVTHLKG
EEEECCCCCEEEECCCCCEEEEECCCCEECCHHHHHHHCCEEEEEEEEHHHHCCCEECCC
QADLEVKVELPPPLLLTPLPVLETTGNSLLKSVLMTIKQRLTHQLLLDYYKWANDETQDL
CCCEEEEEECCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IKNKNYPILSPSSQGI
HHCCCCCEECCCCCCC
>Mature Secondary Structure
MICKFTASQSVDIPVVEQKVPIQHYLRQPKRLVNALVDPTRLEQLDQNCFRLKMRPLHFM
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEE
MLSIQPTVDMRLWSSTKGKIYLKSDRCEIRGVEYINQRFNLNLVGILDTLELKGVTHLKG
EEEECCCCCEEEECCCCCEEEEECCCCEECCHHHHHHHCCEEEEEEEEHHHHCCCEECCC
QADLEVKVELPPPLLLTPLPVLETTGNSLLKSVLMTIKQRLTHQLLLDYYKWANDETQDL
CCCEEEEEECCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IKNKNYPILSPSSQGI
HHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1551590 [H]