| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is acpP
Identifier: 113474323
GI number: 113474323
Start: 718330
End: 718596
Strand: Reverse
Name: acpP
Synonym: Tery_0452
Alternate gene names: 113474323
Gene position: 718596-718330 (Counterclockwise)
Preceding gene: 113474328
Following gene: 113474322
Centisome position: 9.27
GC content: 37.08
Gene sequence:
>267_bases ATGACCAACGATAGTGTTCCGGCGAAAGTCATGGAAATTGTGGCTAAACAACTGGAAAAAGACCAAAAAGAAGTCACGCC AGAATCGAGTTTTGCTAACGATCTAGGAGCTGATTCTTTAGATACTGTAGAATTAGTCATGGCATTGGAAGAAGAATTTG GTACAGAGATTCCAGATGAAGAAGCAGAAAAAATTACTACTGTCCAAGCTGCTGTGGATTATATTCAAAACAAGATGGAT GATGGAAAAATAAAACTGGAAAAATAA
Upstream 100 bases:
>100_bases AAAGATACTCAATTGCCATAATTAATTGTTAGTTTTAACCTAGTTTCAGATAAAATTGGAAACGCAACATTTAAATAATT TCAAGTAAGGAGAAAATTTT
Downstream 100 bases:
>100_bases TTATTTACTACTTTAAATGTGTTGGAAAATAGTATCCCGTTATAGCTTTAGCTTAACGGGCTATTAGTTTCTGGGGACTC AGAAAATTAAAGGGTAGCCA
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTNDSVPAKVMEIVAKQLEKDQKEVTPESSFANDLGADSLDTVELVMALEEEFGTEIPDEEAEKITTVQAAVDYIQNKMD DGKIKLEK
Sequences:
>Translated_88_residues MTNDSVPAKVMEIVAKQLEKDQKEVTPESSFANDLGADSLDTVELVMALEEEFGTEIPDEEAEKITTVQAAVDYIQNKMD DGKIKLEK >Mature_87_residues TNDSVPAKVMEIVAKQLEKDQKEVTPESSFANDLGADSLDTVELVMALEEEFGTEIPDEEAEKITTVQAAVDYIQNKMDD GKIKLEK
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Homo sapiens, GI4826852, Length=80, Percent_Identity=42.5, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1787336, Length=74, Percent_Identity=67.5675675675676, Blast_Score=98, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17556294, Length=60, Percent_Identity=53.3333333333333, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322656, Length=85, Percent_Identity=40, Blast_Score=64, Evalue=4e-12, Organism=Drosophila melanogaster, GI17136932, Length=79, Percent_Identity=40.5063291139241, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI17136934, Length=60, Percent_Identity=50, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_TRIEI (Q119B3)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720384.1 - ProteinModelPortal: Q119B3 - SMR: Q119B3 - STRING: Q119B3 - GeneID: 4242230 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0452 - NMPDR: fig|203124.1.peg.4573 - eggNOG: COG0236 - HOGENOM: HBG755218 - OMA: QINISDA - PhylomeDB: Q119B3 - BioCyc: TERY203124:TERY_0452-MONOMER - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 9747; Mature: 9616
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDSVPAKVMEIVAKQLEKDQKEVTPESSFANDLGADSLDTVELVMALEEEFGTEIPDE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCH EAEKITTVQAAVDYIQNKMDDGKIKLEK HHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure TNDSVPAKVMEIVAKQLEKDQKEVTPESSFANDLGADSLDTVELVMALEEEFGTEIPDE CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCH EAEKITTVQAAVDYIQNKMDDGKIKLEK HHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA