| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ydjG [C]
Identifier: 113474328
GI number: 113474328
Start: 725804
End: 726748
Strand: Reverse
Name: ydjG [C]
Synonym: Tery_0458
Alternate gene names: 113474328
Gene position: 726748-725804 (Counterclockwise)
Preceding gene: 113474330
Following gene: 113474323
Centisome position: 9.38
GC content: 35.66
Gene sequence:
>945_bases ATGGCAACAACTACTCTAGGTACAACAGGAATAACTGTTAACCCAATTTGTATCGGCACTTGGGCTTGGGGGGATAAACT TTTTTGGAATTATGGCAGTAATTATGGAGCAAATGAAGTAGAAGCCGCTTTTAAAACCTCCCTAGAAGCTGGGGTAAATT TCTTTGATACTGCCGAAGTTTATGGCAATGGTTTATCAGAAGAATTGCTGGGAAAATTTATGCAAGAAACTGAAAGACCT GTGCAAATTGCTACTAAATATGGTCCTCTACCTTGGCGACTTTTTCCAGACTCAGTTGCTGATGCTGTGACTGCTAGTCT AAAACGATTAATAGTTCCCAAAGTTACTCTTTATCAAGTACATTGGCCTTTTACATTTTTGATGAGTCAGGAAACATTAT TAAATGCTTTAGCAGATGAAGTTAAGCAGGGTAGAATTGAAGCGGTTGGTGTTAGTAATTATTCTGAGGAAGAGATGAGT CAAGCTCATAAAATTTTGGAAAAACGAGGGGTAATATTAGCCACAAATCAAGTGAAATATTCTTTGCTTTCCCGTAAAAT AGAAACTAAAGGAATTTTAAATACAGCCAAAAAATTAGGAATTACAATTTTAGCTTATAGTCCTTTAGCTCAAGGGTTAT TAACTGGAAAATACACTTTAGAAAAGTCACCTACTGGGGCTCGCCAATTTGATTTTCGTTTTCAAAAGAGTGGTTTAGAA AAAATTGCTCCCGTTATGTCTTTGTTAAACCAAATTGGGGAAAAATATAACAAAACTCCGGCACAAGTTGCACTTAATTG GTTAGTTTTTCAAGATAGTGTAATTCCTATTGCTGGCTGTAAAAATTCTGAGCAAGTTCGACAAAATATTGGAGCAATAG GTTGGGAAATGACTCAAGAAGAATTTAATCAATTAGAACAAATTACTCGCCCTTGGTTAAATTGA
Upstream 100 bases:
>100_bases ATATTAAGAGAACTGAATTAACATCTATTTAGATGGAAATATAACCGACAATTCATCGTCAATTTCCAGACATTATACAG TAATTAGGAAAACTTTTACC
Downstream 100 bases:
>100_bases AAATGAAAGTATTAACTTAATCAAAAAAATAGGGAAGGGTTTGGTGTATTAAGGGGAGTTGATGAGGAAGTGACAAATTA ATAGTTTGTTCATTTTTGTA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERP VQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMS QAHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN
Sequences:
>Translated_314_residues MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERP VQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMS QAHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN >Mature_313_residues ATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERPV QIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQ AHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLEK IAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI223718702, Length=288, Percent_Identity=32.6388888888889, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI41327764, Length=270, Percent_Identity=32.962962962963, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI27436962, Length=339, Percent_Identity=26.2536873156342, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI41152114, Length=286, Percent_Identity=31.1188811188811, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI27436966, Length=339, Percent_Identity=25.9587020648968, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436964, Length=339, Percent_Identity=25.9587020648968, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436969, Length=311, Percent_Identity=25.4019292604502, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4504825, Length=306, Percent_Identity=25.4901960784314, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1788070, Length=335, Percent_Identity=30.7462686567164, Blast_Score=134, Evalue=8e-33, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=28.75, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=27.5757575757576, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788081, Length=280, Percent_Identity=29.2857142857143, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1789199, Length=339, Percent_Identity=28.023598820059, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082198, Length=275, Percent_Identity=22.9090909090909, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786400, Length=238, Percent_Identity=28.9915966386555, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17564128, Length=327, Percent_Identity=25.3822629969419, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17566692, Length=323, Percent_Identity=24.4582043343653, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17550248, Length=321, Percent_Identity=26.791277258567, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6325384, Length=287, Percent_Identity=27.1777003484321, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320079, Length=290, Percent_Identity=24.8275862068966, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644950, Length=325, Percent_Identity=27.3846153846154, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24657054, Length=298, Percent_Identity=23.489932885906, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24646159, Length=226, Percent_Identity=27.8761061946903, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35009; Mature: 34877
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEV CCCCEECCCCCEECCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCHHH YGNGLSEELLGKFMQETERPVQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQV HCCCCCHHHHHHHHHHCCCCEEEHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEEE HWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQAHKILEKRGVILATNQVKY ECCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECHHHH SLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE HHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCHH KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQE HHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHCCHHHHHH EFNQLEQITRPWLN HHHHHHHHHHCCCC >Mature Secondary Structure ATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEV CCCEECCCCCEECCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCHHH YGNGLSEELLGKFMQETERPVQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQV HCCCCCHHHHHHHHHHCCCCEEEHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEEE HWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQAHKILEKRGVILATNQVKY ECCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECHHHH SLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE HHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCHH KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQE HHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHCCHHHHHH EFNQLEQITRPWLN HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]