Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474251

Identifier: 113474251

GI number: 113474251

Start: 569567

End: 570250

Strand: Reverse

Name: 113474251

Synonym: Tery_0370

Alternate gene names: NA

Gene position: 570250-569567 (Counterclockwise)

Preceding gene: 113474252

Following gene: 113474250

Centisome position: 7.36

GC content: 34.65

Gene sequence:

>684_bases
TTGAGCGGTTATCTTATTTATCACCCTCCTCGTGTAGTTTCAAATTTTGAAACTACGAAAGTTTACCACGACAACACAAA
TGGTAATCAAGATCCCTATGTTTGGAATCAAAAGTTTCTTCATACTTATTGCCACATTACTCAAATGTCACCACAAGTTG
GCAATATAAACTTTTGGGTTTCTGGTGACACCTTTCCCAACTTTAGTAATCTTTATTGTGATTTAGTATTTATAGTTGCA
GAAAAGCTAGAGTGGGAAAATCCTAATACTATAAAAACTTCAGACCCTATTATTGATACTCATGAAGCATATAACGATCA
TTATAGTTGGTTTTGGCAGCATCACTATCAGCGTCGTCGCAGATTTACTTTGAAAGCAGACCCAGAATCTAGTTTTCAAC
CACAAAATATTTCTCAAGAATTAATTGATATTGTTCCCTTTTTACTACAGCAAGGTTTGACATTAACTCAACTTCGTAAA
AATTTGCGTTCAGGTTTTACTTCTAAACCCATGGGTTTAGGTTTGATAGCAGCTAAACTTTATTCCTGGCTAAATCAATA
TGCAAACGTTAAATTATCTGGAGCTAAATTACAAAAAATTCGCCAAGAAAATTCCCATCTTGCCAGTGTCAGGGCAAACG
CATCTTGTACAAAAAAATCGCAAAAAAAATCTCTCTCTTGCTAG

Upstream 100 bases:

>100_bases
TAAATACTACATTTTGAGGTACGGAATCTGGGATAGAAACAAATCAACCAAATTCGAGTCAAGAAATGGTATAAATTAAA
TTTTTAGGAGGCATATAATT

Downstream 100 bases:

>100_bases
CACCAGGGTAAACGCATTTTGTCAATAAACCTGGAGTTATTATCAATAAATAAAGCTTTATGGCGCTTGTTGATAATATA
CAGGGCTTTGCGTTGTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSGYLIYHPPRVVSNFETTKVYHDNTNGNQDPYVWNQKFLHTYCHITQMSPQVGNINFWVSGDTFPNFSNLYCDLVFIVA
EKLEWENPNTIKTSDPIIDTHEAYNDHYSWFWQHHYQRRRRFTLKADPESSFQPQNISQELIDIVPFLLQQGLTLTQLRK
NLRSGFTSKPMGLGLIAAKLYSWLNQYANVKLSGAKLQKIRQENSHLASVRANASCTKKSQKKSLSC

Sequences:

>Translated_227_residues
MSGYLIYHPPRVVSNFETTKVYHDNTNGNQDPYVWNQKFLHTYCHITQMSPQVGNINFWVSGDTFPNFSNLYCDLVFIVA
EKLEWENPNTIKTSDPIIDTHEAYNDHYSWFWQHHYQRRRRFTLKADPESSFQPQNISQELIDIVPFLLQQGLTLTQLRK
NLRSGFTSKPMGLGLIAAKLYSWLNQYANVKLSGAKLQKIRQENSHLASVRANASCTKKSQKKSLSC
>Mature_226_residues
SGYLIYHPPRVVSNFETTKVYHDNTNGNQDPYVWNQKFLHTYCHITQMSPQVGNINFWVSGDTFPNFSNLYCDLVFIVAE
KLEWENPNTIKTSDPIIDTHEAYNDHYSWFWQHHYQRRRRFTLKADPESSFQPQNISQELIDIVPFLLQQGLTLTQLRKN
LRSGFTSKPMGLGLIAAKLYSWLNQYANVKLSGAKLQKIRQENSHLASVRANASCTKKSQKKSLSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26365; Mature: 26234

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYLIYHPPRVVSNFETTKVYHDNTNGNQDPYVWNQKFLHTYCHITQMSPQVGNINFWV
CCCEEEECCCHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEE
SGDTFPNFSNLYCDLVFIVAEKLEWENPNTIKTSDPIIDTHEAYNDHYSWFWQHHYQRRR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
RFTLKADPESSFQPQNISQELIDIVPFLLQQGLTLTQLRKNLRSGFTSKPMGLGLIAAKL
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
YSWLNQYANVKLSGAKLQKIRQENSHLASVRANASCTKKSQKKSLSC
HHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SGYLIYHPPRVVSNFETTKVYHDNTNGNQDPYVWNQKFLHTYCHITQMSPQVGNINFWV
CCEEEECCCHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEE
SGDTFPNFSNLYCDLVFIVAEKLEWENPNTIKTSDPIIDTHEAYNDHYSWFWQHHYQRRR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
RFTLKADPESSFQPQNISQELIDIVPFLLQQGLTLTQLRKNLRSGFTSKPMGLGLIAAKL
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
YSWLNQYANVKLSGAKLQKIRQENSHLASVRANASCTKKSQKKSLSC
HHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA