| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474250
Identifier: 113474250
GI number: 113474250
Start: 568161
End: 568865
Strand: Reverse
Name: 113474250
Synonym: Tery_0369
Alternate gene names: NA
Gene position: 568865-568161 (Counterclockwise)
Preceding gene: 113474251
Following gene: 113474245
Centisome position: 7.34
GC content: 35.46
Gene sequence:
>705_bases ATGTTGCTTCAAGACAAACAAATGACTGCACAAGATTTCATGTCCTTACTGGATGAGATTATTGAAAAACAACATTTACT TAAGCACACATTCTACCAAATGTGGAATCAAGGAAAATTATCTTTAAAAATGTTGCAGGAGTACGCTCAGGAATATTATC TACAAGTTCATTATTTCCCTACTTATATTAGCGCTACTCATGCAGCTTGTGATGATTTAGAAATTCGTAAAATGCTCTTA GAAAATCTGATTGAAGAAGAAATGGGAGCAGCAAATCACCCTGAGTTATGGTTACGTTTTGCTGAAGGTTTGGATGTAAA AAGAGAAGCAGTTAAAGAGCGGGAACATTTAGCAAAAACCAAGAAATCTGTAAGTATTCTCAAGGAATTAGCTGGGAGTG AAAACCCGGCTAAAGGTTTAGCTGCTCTTTATGCTTATGAATCACAAATTCCTGAGGTTGCTAGTACTAAAATTGCTGGT TTAAAAGAATTTTATGGGATTAATTCTGAAGCAGCTCTATCATTTTTTAAAGTACATGAAAAAGCTGATGAAATTCACAG CAAAGTCACAAAAGAAGCATTAGTAAAACTATGTGAAACTGATGCTCAGAAAGAGGAAGCGTTGGCAGCAGCAGCAACAG CGGTGGATGCTTTGAATTTATTGCTTGATGGTGTTTATGAAGAATATTGTCAAGCTGTGAATTAA
Upstream 100 bases:
>100_bases TCTAAATTGAGTTTATAAAAAAAATATTTTATATTCTTGACAAACCAGAAAGTTGTGTTATTTTAGCATTGATATTTAAT ATTTAGTTAAGCGAATAAGT
Downstream 100 bases:
>100_bases TGGTTAATTAACATGTTGAATAATTAGCTTACTAAACAGAGACTAGAGGTTTTGTATATCTACTTCTAGTCTCTATTAGA CCATTATACCAGTTTTTCTG
Product: TENA/THI-4 protein
Products: NA
Alternate protein names: Chlamydia protein associating with death domains; CADD [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLLQDKQMTAQDFMSLLDEIIEKQHLLKHTFYQMWNQGKLSLKMLQEYAQEYYLQVHYFPTYISATHAACDDLEIRKMLL ENLIEEEMGAANHPELWLRFAEGLDVKREAVKEREHLAKTKKSVSILKELAGSENPAKGLAALYAYESQIPEVASTKIAG LKEFYGINSEAALSFFKVHEKADEIHSKVTKEALVKLCETDAQKEEALAAAATAVDALNLLLDGVYEEYCQAVN
Sequences:
>Translated_234_residues MLLQDKQMTAQDFMSLLDEIIEKQHLLKHTFYQMWNQGKLSLKMLQEYAQEYYLQVHYFPTYISATHAACDDLEIRKMLL ENLIEEEMGAANHPELWLRFAEGLDVKREAVKEREHLAKTKKSVSILKELAGSENPAKGLAALYAYESQIPEVASTKIAG LKEFYGINSEAALSFFKVHEKADEIHSKVTKEALVKLCETDAQKEEALAAAATAVDALNLLLDGVYEEYCQAVN >Mature_234_residues MLLQDKQMTAQDFMSLLDEIIEKQHLLKHTFYQMWNQGKLSLKMLQEYAQEYYLQVHYFPTYISATHAACDDLEIRKMLL ENLIEEEMGAANHPELWLRFAEGLDVKREAVKEREHLAKTKKSVSILKELAGSENPAKGLAALYAYESQIPEVASTKIAG LKEFYGINSEAALSFFKVHEKADEIHSKVTKEALVKLCETDAQKEEALAAAATAVDALNLLLDGVYEEYCQAVN
Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Secreted. Note=Secreted into the host cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: NA
Molecular weight: Translated: 26535; Mature: 26535
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQDKQMTAQDFMSLLDEIIEKQHLLKHTFYQMWNQGKLSLKMLQEYAQEYYLQVHYFP CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TYISATHAACDDLEIRKMLLENLIEEEMGAANHPELWLRFAEGLDVKREAVKEREHLAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH KKSVSILKELAGSENPAKGLAALYAYESQIPEVASTKIAGLKEFYGINSEAALSFFKVHE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KADEIHSKVTKEALVKLCETDAQKEEALAAAATAVDALNLLLDGVYEEYCQAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLQDKQMTAQDFMSLLDEIIEKQHLLKHTFYQMWNQGKLSLKMLQEYAQEYYLQVHYFP CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TYISATHAACDDLEIRKMLLENLIEEEMGAANHPELWLRFAEGLDVKREAVKEREHLAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH KKSVSILKELAGSENPAKGLAALYAYESQIPEVASTKIAGLKEFYGINSEAALSFFKVHE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KADEIHSKVTKEALVKLCETDAQKEEALAAAATAVDALNLLLDGVYEEYCQAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]