| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yheT [C]
Identifier: 113474175
GI number: 113474175
Start: 433208
End: 434281
Strand: Reverse
Name: yheT [C]
Synonym: Tery_0281
Alternate gene names: 113474175
Gene position: 434281-433208 (Counterclockwise)
Preceding gene: 113474177
Following gene: 113474174
Centisome position: 5.6
GC content: 35.94
Gene sequence:
>1074_bases ATGGGTAATCCTTCTTATTCCCCTCCGTGGTTCTTAAAAAACGGTTTAGCAATGACTCTCTATGCAACGTTTTGGATACC CCGTTTTTGGGAAGAGACTATTAAATTTTCTAAGCTTTCTTACCAAGATATAATTTTTATTGGTGCAAATGATGTACCAA TTTTTGGGTGGATGGCTATCCCAGAAAACCCAAAAGGTACAATTATTGGGACTTATGGAATTACAGGAGATTTAGATAAT CAATGGTTCTTAAAGCTATTGGGACGAAAAGCCTATGCTCAAGGTTATGCCGTTGTTTTATTTGATTGGCGTGCCCACGG TAAGACAGCATTACTATCACCAACTCTAACTTCAGACGGTATTTATGAAGGGCAAGATTTTGTTCATATTGCTGCTCAAG CAAAAGCAATGGGTTGTCCACCTAATTTTTGGTTTACTGGATATTCTTTGGGAGGACAACTAACACTTTGGGGTGCTAAA GTAGCAGAAAGTCTGGCTCCAGAATTAGGATTAGCAGAAACAGATATTGGTGGTTGTGCAGTTATTTGTCCCAGTCTAGA AGCTCAACGTTCTCTCTCTTATTTAAATAGTTTTCCTCTAGGAAAACGCTTAGATAAAGGAATTACTAAAAACCTCAAAA AATTAGCTTGGTTAATTCACGATTATCATCCAGATTTTATAGATATAGAGGCAATAGAACGGGCTAACTCTATCTGGAAA TTTGATGCAGAATTTATTATCAAAAGCTTAGGATTCTCATCAGTAGAAGCTTATTATAAAGCAACAAGTCCTTTATATTT TTTGCCTCATCTTCAGAAAAAAACATTGATTATTTATGCGGAAGATGATCCACTATTTGACCCAACAATTGTGCCAGAAT TAAAAACTATTTGTCAAAATAATTCTGCTATTGATTTGATTTTAACTCGTTACGGTGGTCATGTAGCTCATATTAGCAAC AAATCATGTCAAAAGCTTGCCCAAGATCCTGATATTTGGTGGGCATGGAATCGAGTTTTTGAATGGATTAAACAAAATGA AACAGTAACATCAAGGACTGAAGTTGCTGTCTAA
Upstream 100 bases:
>100_bases GATTTACACTTTATATACTTAGAATCTACTGTAATTTGATTACCATACTGATATACTTTCAGATTAACAAATTTAAGTTT TATGAGATTAAGATTCATCT
Downstream 100 bases:
>100_bases TTTTATCCTCAGGAGTTAGGTAATATTCCTAATTCCTGATAGTTCTTAATTTAGTAGTTAGTAGTTAGTCGTTAGTAGTT AAAGGACCTTTTTTTTACTA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDN QWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAK VAESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISN KSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV
Sequences:
>Translated_357_residues MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDN QWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAK VAESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISN KSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV >Mature_356_residues GNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDNQ WFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKV AESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWKF DAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISNK SCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 40191; Mature: 40060
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAI CCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEC PENPKGTIIGTYGITGDLDNQWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDG CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCC IYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKVAESLAPELGLAETDIGGCA CCCCCCEEEEEEHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCEE VICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQN ECHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC NSAIDLILTRYGGHVAHISNKSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV CCEEEEEEEECCCEEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAI CCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEC PENPKGTIIGTYGITGDLDNQWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDG CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCC IYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKVAESLAPELGLAETDIGGCA CCCCCCEEEEEEHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCEE VICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQN ECHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC NSAIDLILTRYGGHVAHISNKSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV CCEEEEEEEECCCEEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]