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The map label for this gene is ctaC [H]

Identifier: 113474172

GI number: 113474172

Start: 430086

End: 430994

Strand: Reverse

Name: ctaC [H]

Synonym: Tery_0278

Alternate gene names: 113474172

Gene position: 430994-430086 (Counterclockwise)

Preceding gene: 113474173

Following gene: 113474171

Centisome position: 5.56

GC content: 39.16

Gene sequence:

>909_bases
ATGAAAACCCGCACTATTTTAACCTTGGGGGCGATCGCTCTCTTGTTAGCTGCTATTAGTATTTGGATCGGGCAACTCTC
CTACTCATGGTTGCCTCCTCAAGCAGCAGCAGAATCTATGTTAATTGATGAGTTATTTAGTTTTCTGGTCACTCTTGGTA
GTTTCATATTTCTGGGTGTCACTGGAACTATAATGTATTCAATTCTTTTCCAACGTGCTGCTAAATATGATTACAGCGAT
GGGCCACATATTGAGGGTAACGTTACCTTAGAAGTTGTTTGGACAGCAATACCAATTTTTCTAGTATTTTGGATTGCTGC
TTACAGCTACAATGTCTATGAAAAAATGGCTATTCAAGGACCGATGGAATTAGTGCATTTGCATACACCATTAGAAATGG
AATCAGCTTATGCAGATCCATTAGAACCTGTAACTGAACCTGTAGAAGAAATTCAAGTCTATGCTAAACAGTGGTCTTGG
GTATTTCGTTATCCAGAAAATGGAGTGACTAGCACCGAACTGCACTTACCTGTAGATCGGCGTGTGCGGGTAGCGTTAAA
TTCAGAAGATGTGCTGCATGGGTTTTATATTCCTGCGTTTCGACTGAAGCAAGATATTATTCCCAACCATCCAATAGATT
TTGAATTTACTCCAGTTCGTGTTGGCAAATATAGTCTAACTGATTCTCAATATAGCGGTACTTATTTTGCCACAATGGCA
GCAGATGTAGTTGTTGAATCTGCTCAAGATTACAAAAATTGGCTGGCAAAAGTAACGGATAATAAATTATCTCCTGCCAA
AAATCAAGCACATACTGAATATATTCAAAAATTAGAAGCACCTGTGCAACCAGGTTGGCCTTCAGTGAGACCTGCTTCAC
CTCCTATTGTTAATTATCATAATAGTTAG

Upstream 100 bases:

>100_bases
GTTAGCAGCAGAGTTTGGAGTACATAATACTGCTGATGCCTTGTTAGAACTAGGCAAAGATCCTAATATTGTCCTGAAAT
AATCTTAGTAGGATATTGAT

Downstream 100 bases:

>100_bases
GGATAAGGCTCACTAAAGTTAAAACGAATTCAGATATCCTCACTCTTTTCAAACGAAAAAAACATTACTGAACCCTAGCC
TGTAATCAAGGAAAAGAATC

Product: cytochrome c oxidase II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKTRTILTLGAIALLLAAISIWIGQLSYSWLPPQAAAESMLIDELFSFLVTLGSFIFLGVTGTIMYSILFQRAAKYDYSD
GPHIEGNVTLEVVWTAIPIFLVFWIAAYSYNVYEKMAIQGPMELVHLHTPLEMESAYADPLEPVTEPVEEIQVYAKQWSW
VFRYPENGVTSTELHLPVDRRVRVALNSEDVLHGFYIPAFRLKQDIIPNHPIDFEFTPVRVGKYSLTDSQYSGTYFATMA
ADVVVESAQDYKNWLAKVTDNKLSPAKNQAHTEYIQKLEAPVQPGWPSVRPASPPIVNYHNS

Sequences:

>Translated_302_residues
MKTRTILTLGAIALLLAAISIWIGQLSYSWLPPQAAAESMLIDELFSFLVTLGSFIFLGVTGTIMYSILFQRAAKYDYSD
GPHIEGNVTLEVVWTAIPIFLVFWIAAYSYNVYEKMAIQGPMELVHLHTPLEMESAYADPLEPVTEPVEEIQVYAKQWSW
VFRYPENGVTSTELHLPVDRRVRVALNSEDVLHGFYIPAFRLKQDIIPNHPIDFEFTPVRVGKYSLTDSQYSGTYFATMA
ADVVVESAQDYKNWLAKVTDNKLSPAKNQAHTEYIQKLEAPVQPGWPSVRPASPPIVNYHNS
>Mature_302_residues
MKTRTILTLGAIALLLAAISIWIGQLSYSWLPPQAAAESMLIDELFSFLVTLGSFIFLGVTGTIMYSILFQRAAKYDYSD
GPHIEGNVTLEVVWTAIPIFLVFWIAAYSYNVYEKMAIQGPMELVHLHTPLEMESAYADPLEPVTEPVEEIQVYAKQWSW
VFRYPENGVTSTELHLPVDRRVRVALNSEDVLHGFYIPAFRLKQDIIPNHPIDFEFTPVRVGKYSLTDSQYSGTYFATMA
ADVVVESAQDYKNWLAKVTDNKLSPAKNQAHTEYIQKLEAPVQPGWPSVRPASPPIVNYHNS

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 34107; Mature: 34107

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRTILTLGAIALLLAAISIWIGQLSYSWLPPQAAAESMLIDELFSFLVTLGSFIFLGV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTIMYSILFQRAAKYDYSDGPHIEGNVTLEVVWTAIPIFLVFWIAAYSYNVYEKMAIQG
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PMELVHLHTPLEMESAYADPLEPVTEPVEEIQVYAKQWSWVFRYPENGVTSTELHLPVDR
CHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCC
RVRVALNSEDVLHGFYIPAFRLKQDIIPNHPIDFEFTPVRVGKYSLTDSQYSGTYFATMA
EEEEEECCCCCHHHHCCCHHHHHHHCCCCCCCCCEEECEEECEEEECCCCCCCEEHHHHH
ADVVVESAQDYKNWLAKVTDNKLSPAKNQAHTEYIQKLEAPVQPGWPSVRPASPPIVNYH
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
NS
CC
>Mature Secondary Structure
MKTRTILTLGAIALLLAAISIWIGQLSYSWLPPQAAAESMLIDELFSFLVTLGSFIFLGV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTIMYSILFQRAAKYDYSDGPHIEGNVTLEVVWTAIPIFLVFWIAAYSYNVYEKMAIQG
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PMELVHLHTPLEMESAYADPLEPVTEPVEEIQVYAKQWSWVFRYPENGVTSTELHLPVDR
CHHEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCC
RVRVALNSEDVLHGFYIPAFRLKQDIIPNHPIDFEFTPVRVGKYSLTDSQYSGTYFATMA
EEEEEECCCCCHHHHCCCHHHHHHHCCCCCCCCCEEECEEECEEEECCCCCCCEEHHHHH
ADVVVESAQDYKNWLAKVTDNKLSPAKNQAHTEYIQKLEAPVQPGWPSVRPASPPIVNYH
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
NS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8383492; 8387368; 8905231 [H]