| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474109
Identifier: 113474109
GI number: 113474109
Start: 314229
End: 314588
Strand: Reverse
Name: 113474109
Synonym: Tery_0208
Alternate gene names: NA
Gene position: 314588-314229 (Counterclockwise)
Preceding gene: 113474111
Following gene: 113474107
Centisome position: 4.06
GC content: 27.22
Gene sequence:
>360_bases ATGAAGAATTTATCTATAAATATAATTCAAGATATCAAAGATTGGAACTATAATAATTCACGGTTTATAGAAATAAAGTA TGAAGATTTAATTCAAGGTATTGATATGAATTTATTTAGAAATATTTTTCAGTTTCTAGGTTTCAATAAGAAGATAATGG CGAGTCTATTAAAAATAGCTTACAATAATAGTCTGTTTTCAGGTTTGGTGTCAAATAGAAAACATATAAGGTCAGGAAAA AAGCAGCAGTGGAAAGAATATTTTAAACCAATTCACACAGCAAGATTTGTGGCCCTATTTGATGATGTTTTGGTTAAACT GAATTATGAGAAAACTAATACAGGTTGGCTTGATAGATAA
Upstream 100 bases:
>100_bases AGAAAAATGGTTACATATTAAAAGAGAATAGTTTTGAGGCTTGACTTATCAATAAAAACTAAATTCTTATTCATTTTTTG ACGATAAGTTAATATTTAAA
Downstream 100 bases:
>100_bases TCAAAATATTTCCAAAACAATTGATGTTGAAATTCATGATTTACACTTATTTATCTGACTTCTTAATGCCAATCTCTTGA TTAGCTTTTACCTTTTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR
Sequences:
>Translated_119_residues MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR >Mature_119_residues MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14240; Mature: 14240
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIA CCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH YNNSLFSGLVSNRKHIRSGKKQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIA CCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH YNNSLFSGLVSNRKHIRSGKKQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA