Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474097

Identifier: 113474097

GI number: 113474097

Start: 294279

End: 294905

Strand: Reverse

Name: 113474097

Synonym: Tery_0196

Alternate gene names: NA

Gene position: 294905-294279 (Counterclockwise)

Preceding gene: 113474099

Following gene: 113474096

Centisome position: 3.81

GC content: 29.67

Gene sequence:

>627_bases
ATGCCAAAATCTAATCAAAGACCAAATAAAAATAAGTCTAAACCTGATAATATACACCTGAAACCAATTGAAATTGATGA
GACTATTGTATCAGGAAAAACATCTAAACTGAATGGTAGAGAAAATTTAGGTAGAACTGCGCCTATTGAAGATTTTTTAC
AGCATATTGATGCTTTTGAAGAGATAGTAAAAGATAATGATGAAGAAGAAAAAAATCGGAGGGAAGTTTTTGAACAAAAA
TTAGAAGAAGTTTTCGGCACTACAAATTTAGAAGTTAATCGAAGTAATTTAAAAAAGTATTTAAAATATCTGAAGAAAAA
TCTAAAAATTCCTTGTTTAGTTAAAGGTATGGAAGAGTTTGAATGGGAAGAATATTATACGATGGGTCCAGGAAGTACAA
AAGAATATAAAAAGCTCAAAAAGACACAACCATCTTACACAGATAAGTTTAATCTTTTAAATTTAGACCAGAAATTAGAC
GTCGAAGATGGAATTTTAGGTGTGTTAGAACGTACTACAGATAATTTAAAGTTTACATTGCCATTGGTTGATTTAGAAGC
GGTTGCAGAAAACTCTGTTAATGCTCAATTATTAGAAGATTATGCGATGTGGTTTTTTCGTTATTGA

Upstream 100 bases:

>100_bases
TGTTATTTGTGTCATAGTTTACTCGTCAGATAGATTAATGGAATTTTTTATTCTATATATATACTCTTTAAATGATAAAC
CTGAATAAGGTAAGAATTAT

Downstream 100 bases:

>100_bases
TAAGTGGTGAAATAATTATAGTAGTCCACACATTGGTTGTGGCAAAATTCCATACTTAAAAACTTTGGAAAAGTTGAATA
TTCAAATATCGGTAACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPKSNQRPNKNKSKPDNIHLKPIEIDETIVSGKTSKLNGRENLGRTAPIEDFLQHIDAFEEIVKDNDEEEKNRREVFEQK
LEEVFGTTNLEVNRSNLKKYLKYLKKNLKIPCLVKGMEEFEWEEYYTMGPGSTKEYKKLKKTQPSYTDKFNLLNLDQKLD
VEDGILGVLERTTDNLKFTLPLVDLEAVAENSVNAQLLEDYAMWFFRY

Sequences:

>Translated_208_residues
MPKSNQRPNKNKSKPDNIHLKPIEIDETIVSGKTSKLNGRENLGRTAPIEDFLQHIDAFEEIVKDNDEEEKNRREVFEQK
LEEVFGTTNLEVNRSNLKKYLKYLKKNLKIPCLVKGMEEFEWEEYYTMGPGSTKEYKKLKKTQPSYTDKFNLLNLDQKLD
VEDGILGVLERTTDNLKFTLPLVDLEAVAENSVNAQLLEDYAMWFFRY
>Mature_207_residues
PKSNQRPNKNKSKPDNIHLKPIEIDETIVSGKTSKLNGRENLGRTAPIEDFLQHIDAFEEIVKDNDEEEKNRREVFEQKL
EEVFGTTNLEVNRSNLKKYLKYLKKNLKIPCLVKGMEEFEWEEYYTMGPGSTKEYKKLKKTQPSYTDKFNLLNLDQKLDV
EDGILGVLERTTDNLKFTLPLVDLEAVAENSVNAQLLEDYAMWFFRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24358; Mature: 24227

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSNQRPNKNKSKPDNIHLKPIEIDETIVSGKTSKLNGRENLGRTAPIEDFLQHIDAFE
CCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
EIVKDNDEEEKNRREVFEQKLEEVFGTTNLEVNRSNLKKYLKYLKKNLKIPCLVKGMEEF
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCHHHHCHHHH
EWEEYYTMGPGSTKEYKKLKKTQPSYTDKFNLLNLDQKLDVEDGILGVLERTTDNLKFTL
CHHHEEECCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEE
PLVDLEAVAENSVNAQLLEDYAMWFFRY
EHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKSNQRPNKNKSKPDNIHLKPIEIDETIVSGKTSKLNGRENLGRTAPIEDFLQHIDAFE
CCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
EIVKDNDEEEKNRREVFEQKLEEVFGTTNLEVNRSNLKKYLKYLKKNLKIPCLVKGMEEF
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCHHHHCHHHH
EWEEYYTMGPGSTKEYKKLKKTQPSYTDKFNLLNLDQKLDVEDGILGVLERTTDNLKFTL
CHHHEEECCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEE
PLVDLEAVAENSVNAQLLEDYAMWFFRY
EHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA