Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474079

Identifier: 113474079

GI number: 113474079

Start: 262109

End: 262288

Strand: Direct

Name: 113474079

Synonym: Tery_0175

Alternate gene names: NA

Gene position: 262109-262288 (Clockwise)

Preceding gene: 113474078

Following gene: 113474081

Centisome position: 3.38

GC content: 44.44

Gene sequence:

>180_bases
TTGGAGCGGTTGGCGCGGGGTTCTGGAGTTTCTGCTCAAGTTTTGAGTCTGGGTGGAATGAGTGCTTCCCCTGTTATGGA
TATGAGGGGTAAGGTTTTGGGAGTTTATGGGATAAGTCGTCTGGAAATTATCAAGTCCTTTGTTTTACAAAAAGGAGGTT
TATTGACTCAGAATGGTTAG

Upstream 100 bases:

>100_bases
TTTAGATGTTCTCAAAATAGGTAGTTCTTTCTATATTTCTGGTTTTCCTAGTCGGGGTTAAAGGCTCCTAACCCAGTTTA
TTGAAAGTGATGTTTCTGGT

Downstream 100 bases:

>100_bases
CTACTTACGAGGTTGTGCAACGAGTAGAAAGGGATGTTCAAAGTTTGACTTTTTCTTGAGCTCAACTTATGGTTTTTGAC
TTGACTAGTACTATTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG

Sequences:

>Translated_59_residues
MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG
>Mature_59_residues
MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6165; Mature: 6165

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA