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The map label for this gene is ruvA [H]

Identifier: 113474071

GI number: 113474071

Start: 248855

End: 249184

Strand: Direct

Name: ruvA [H]

Synonym: Tery_0165

Alternate gene names: 113474071

Gene position: 248855-249184 (Clockwise)

Preceding gene: 113474066

Following gene: 113474072

Centisome position: 3.21

GC content: 39.09

Gene sequence:

>330_bases
ATGATTAACTATCTAAAAGGCAAAGTGGCAAATGTGTACAAAGGCAGTGGTTTTCGTATGACTGTAATTTTAGAGGTTAA
TCAAGTAGGTTATGAGCTACAAGTTCTACCTCGTTTAACTCAGAGTTTACAGGAAGGGAAGCAGGTGCAAGTTTTTACTC
ACCAACAAATGCGAGAAGACCAAATGGTCTTGTACGGTTTTGGTACTTCAGCTGAAAGAGACTTATTTCGTCAGTTAGTA
AGCGTAAGTGGTATTGGGGCACAATTAGCGATCGCTCTATTAGATACTCTGTGCGACTTGTTGGCCACTAAACCTTTAAT
TAGGATATAA

Upstream 100 bases:

>100_bases
AAGTAAATCTAGTATAATCTGAAACTTTGTGAATATTAACTTTGTTGTTTCAAGAGTTGTCATTAATATATAATTTGATG
ATAATTTTGAATTAATTTGA

Downstream 100 bases:

>100_bases
ATGGCCGTTCCAAGTCAACACATGAGGACAACCTCGACTTGTGAATAACTCTTATGACCTTGTAGGTGAGATTCCTACCG
CCTTGTTGTTGGGTTGACAG

Product: DNA recombination protein RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MINYLKGKVANVYKGSGFRMTVILEVNQVGYELQVLPRLTQSLQEGKQVQVFTHQQMREDQMVLYGFGTSAERDLFRQLV
SVSGIGAQLAIALLDTLCDLLATKPLIRI

Sequences:

>Translated_109_residues
MINYLKGKVANVYKGSGFRMTVILEVNQVGYELQVLPRLTQSLQEGKQVQVFTHQQMREDQMVLYGFGTSAERDLFRQLV
SVSGIGAQLAIALLDTLCDLLATKPLIRI
>Mature_109_residues
MINYLKGKVANVYKGSGFRMTVILEVNQVGYELQVLPRLTQSLQEGKQVQVFTHQQMREDQMVLYGFGTSAERDLFRQLV
SVSGIGAQLAIALLDTLCDLLATKPLIRI

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=78, Percent_Identity=41.025641025641, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 12217; Mature: 12217

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYLKGKVANVYKGSGFRMTVILEVNQVGYELQVLPRLTQSLQEGKQVQVFTHQQMRED
CCCCCCCCCCCEEECCCEEEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEEHHHCCCC
QMVLYGFGTSAERDLFRQLVSVSGIGAQLAIALLDTLCDLLATKPLIRI
CEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MINYLKGKVANVYKGSGFRMTVILEVNQVGYELQVLPRLTQSLQEGKQVQVFTHQQMRED
CCCCCCCCCCCEEECCCEEEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEEHHHCCCC
QMVLYGFGTSAERDLFRQLVSVSGIGAQLAIALLDTLCDLLATKPLIRI
CEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA