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The map label for this gene is ruvA [H]

Identifier: 113474072

GI number: 113474072

Start: 251225

End: 251584

Strand: Direct

Name: ruvA [H]

Synonym: Tery_0168

Alternate gene names: 113474072

Gene position: 251225-251584 (Clockwise)

Preceding gene: 113474071

Following gene: 113474073

Centisome position: 3.24

GC content: 38.06

Gene sequence:

>360_bases
TTGCTTAGTTTAACAGAATTACCCGACTTAGTTCAAGCTATTGTTGGTGGAAATACTCGTGTATTAGCCAAAACCCCAGG
AGTAGGAGCAAAAACAGCAGAACGTATTACTTTAGAATTGAAAAATAAATTGGCCGAGTGGCGACAAGATGCAGGTTTAA
CTACATCAGTACCAGTGGGAGTTATGCCTGCTATTCAAGAAGAAGTAGAAATGACTTTGTTGGCTTTAGGATACACAGGT
CAAGAAGTAATACAATCATTGCAAGCAGTTAGTAAAGATGCTAATATGTCCAAAAATACAAATGCAGAAGACTGGATTCG
AGAAGCTATTAGTTGGTTGAGTCGTTCTACTCAACTGTAA

Upstream 100 bases:

>100_bases
CCTTGAATGGGACGTTTAAGAGAGGAGCCGTGATGAGGTGAAAGTCTCACGTCCGGTTCTGAAGACGAGCAGACCTTATA
AAGGATAACCGGAAATTGGT

Downstream 100 bases:

>100_bases
AAATTTCATATAGGTATTTATAAGAATTAATTTATGTGATATAGTAACAGTTTGTAGTATTTTTTTAAAGGTTAATAAAT
AAAGTATATGGCTCTCAAAC

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLSLTELPDLVQAIVGGNTRVLAKTPGVGAKTAERITLELKNKLAEWRQDAGLTTSVPVGVMPAIQEEVEMTLLALGYTG
QEVIQSLQAVSKDANMSKNTNAEDWIREAISWLSRSTQL

Sequences:

>Translated_119_residues
MLSLTELPDLVQAIVGGNTRVLAKTPGVGAKTAERITLELKNKLAEWRQDAGLTTSVPVGVMPAIQEEVEMTLLALGYTG
QEVIQSLQAVSKDANMSKNTNAEDWIREAISWLSRSTQL
>Mature_119_residues
MLSLTELPDLVQAIVGGNTRVLAKTPGVGAKTAERITLELKNKLAEWRQDAGLTTSVPVGVMPAIQEEVEMTLLALGYTG
QEVIQSLQAVSKDANMSKNTNAEDWIREAISWLSRSTQL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 12908; Mature: 12908

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLTELPDLVQAIVGGNTRVLAKTPGVGAKTAERITLELKNKLAEWRQDAGLTTSVPVG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VMPAIQEEVEMTLLALGYTGQEVIQSLQAVSKDANMSKNTNAEDWIREAISWLSRSTQL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLTELPDLVQAIVGGNTRVLAKTPGVGAKTAERITLELKNKLAEWRQDAGLTTSVPVG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VMPAIQEEVEMTLLALGYTGQEVIQSLQAVSKDANMSKNTNAEDWIREAISWLSRSTQL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA