Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474066

Identifier: 113474066

GI number: 113474066

Start: 241221

End: 242240

Strand: Direct

Name: 113474066

Synonym: Tery_0160

Alternate gene names: NA

Gene position: 241221-242240 (Clockwise)

Preceding gene: 113474065

Following gene: 113474071

Centisome position: 3.11

GC content: 37.65

Gene sequence:

>1020_bases
ATGAATAACGAAACGAACAAACAGGTGGAAATTTTTGAAAAAAATTTCTTTGATTGGCTTCTATCGAAGCCAAATTCTAC
AGAAATATCAACAGTAATAGATAGTCCAAAGTCCATAAATAATATGGAAGCAGAAGTCAAGGAAGAGTTGGACGAACTCT
ATCCAGATGATTCCGAAGAAATTGGCTGTCTCAACTGCAACGGACGTCCACCAATGCCACTGGGAGAAGTACTAACTGTG
TATAATCGTTTCGAGTCATTGTTACAAAAACGGATGAAAACTGAGATTGAATCTAAACCACCACTGTTTCCTTGGGAAGA
AGTGGGATACGATACTGACTATCCAGACGTTGAAGCTAAAGATTTAGTTTTCCCAATTCCTCCTTGGGCATCACAAATGA
AAAATATCAAGTGGAGAAACTTATCTATACCTTTAACATATAGTGTATTTACTCGACTTTTGCAGTCTTGCCAAGAGATT
GTGCAATCCAATTTACTACCTGGTAGTAGATTGGTTAAAGTTGTAGATAATTTGTTCCCTGGCCAATCTCAGTCCCTAAA
TCATTTAGCCAGCTTAGTCTTAGTGGGTCAAACCCGTGATGGAGAGTTGCCTTCCCTGGAAGTTATAACTTACAATAGTG
CAACTCCAAGACAACAAATGTTGTTGTCTTTACTTGCTGCTAAAGAGATTCTATCATCTTTAACTTTGATCTGTTATTTA
AACGGGTCAGTGGTAAGAAGACAGTGGGAAACTGCTGTAGGTTTGATTAATATTGAGGCTGAATATTATATTGCTGAAGA
TAAGTCTTCTGCATCTTTGAGATGTAAAGGGGAATTACCAGAAGCAGCAAGTCTAAAACTGCAAGGTGGAGAAGCTCAAA
CAACTGCTCAATGTTCTGAGGCTGGTACTCTATTGGTAGAATTGTTTGATCCAGAACCTGAGCAAAAATATGAGCTAACT
GTTAAGTTTTCAAATTGGGAAGAACCTTTAAAATTTGCTGTTTGTCTTCAAGACCTTTAA

Upstream 100 bases:

>100_bases
GGTCGTAAAATCAACCAGGTTAAGAAAAAGTGGTATAAATTACTCGAACTTGCCTGGGAATTACGAAATCGTTCAGGTTC
CGGAGCAGGGGCATCAAGTG

Downstream 100 bases:

>100_bases
TGACTAAATTTGTAGCTACAAAATTCTAGTGACAAATGGCTAAGAATAATAATATACTGTGCCTATGCTGGTAAAATCTT
AAATAGATGCTTCTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNNETNKQVEIFEKNFFDWLLSKPNSTEISTVIDSPKSINNMEAEVKEELDELYPDDSEEIGCLNCNGRPPMPLGEVLTV
YNRFESLLQKRMKTEIESKPPLFPWEEVGYDTDYPDVEAKDLVFPIPPWASQMKNIKWRNLSIPLTYSVFTRLLQSCQEI
VQSNLLPGSRLVKVVDNLFPGQSQSLNHLASLVLVGQTRDGELPSLEVITYNSATPRQQMLLSLLAAKEILSSLTLICYL
NGSVVRRQWETAVGLINIEAEYYIAEDKSSASLRCKGELPEAASLKLQGGEAQTTAQCSEAGTLLVELFDPEPEQKYELT
VKFSNWEEPLKFAVCLQDL

Sequences:

>Translated_339_residues
MNNETNKQVEIFEKNFFDWLLSKPNSTEISTVIDSPKSINNMEAEVKEELDELYPDDSEEIGCLNCNGRPPMPLGEVLTV
YNRFESLLQKRMKTEIESKPPLFPWEEVGYDTDYPDVEAKDLVFPIPPWASQMKNIKWRNLSIPLTYSVFTRLLQSCQEI
VQSNLLPGSRLVKVVDNLFPGQSQSLNHLASLVLVGQTRDGELPSLEVITYNSATPRQQMLLSLLAAKEILSSLTLICYL
NGSVVRRQWETAVGLINIEAEYYIAEDKSSASLRCKGELPEAASLKLQGGEAQTTAQCSEAGTLLVELFDPEPEQKYELT
VKFSNWEEPLKFAVCLQDL
>Mature_339_residues
MNNETNKQVEIFEKNFFDWLLSKPNSTEISTVIDSPKSINNMEAEVKEELDELYPDDSEEIGCLNCNGRPPMPLGEVLTV
YNRFESLLQKRMKTEIESKPPLFPWEEVGYDTDYPDVEAKDLVFPIPPWASQMKNIKWRNLSIPLTYSVFTRLLQSCQEI
VQSNLLPGSRLVKVVDNLFPGQSQSLNHLASLVLVGQTRDGELPSLEVITYNSATPRQQMLLSLLAAKEILSSLTLICYL
NGSVVRRQWETAVGLINIEAEYYIAEDKSSASLRCKGELPEAASLKLQGGEAQTTAQCSEAGTLLVELFDPEPEQKYELT
VKFSNWEEPLKFAVCLQDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38263; Mature: 38263

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNETNKQVEIFEKNFFDWLLSKPNSTEISTVIDSPKSINNMEAEVKEELDELYPDDSEE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
IGCLNCNGRPPMPLGEVLTVYNRFESLLQKRMKTEIESKPPLFPWEEVGYDTDYPDVEAK
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCC
DLVFPIPPWASQMKNIKWRNLSIPLTYSVFTRLLQSCQEIVQSNLLPGSRLVKVVDNLFP
CEEEECCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
GQSQSLNHLASLVLVGQTRDGELPSLEVITYNSATPRQQMLLSLLAAKEILSSLTLICYL
CCCHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NGSVVRRQWETAVGLINIEAEYYIAEDKSSASLRCKGELPEAASLKLQGGEAQTTAQCSE
CCHHHHHHHHHHEEEEEEEEEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHC
AGTLLVELFDPEPEQKYELTVKFSNWEEPLKFAVCLQDL
CCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNNETNKQVEIFEKNFFDWLLSKPNSTEISTVIDSPKSINNMEAEVKEELDELYPDDSEE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
IGCLNCNGRPPMPLGEVLTVYNRFESLLQKRMKTEIESKPPLFPWEEVGYDTDYPDVEAK
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCC
DLVFPIPPWASQMKNIKWRNLSIPLTYSVFTRLLQSCQEIVQSNLLPGSRLVKVVDNLFP
CEEEECCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
GQSQSLNHLASLVLVGQTRDGELPSLEVITYNSATPRQQMLLSLLAAKEILSSLTLICYL
CCCHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NGSVVRRQWETAVGLINIEAEYYIAEDKSSASLRCKGELPEAASLKLQGGEAQTTAQCSE
CCHHHHHHHHHHEEEEEEEEEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHC
AGTLLVELFDPEPEQKYELTVKFSNWEEPLKFAVCLQDL
CCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA