| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474065
Identifier: 113474065
GI number: 113474065
Start: 240062
End: 241228
Strand: Direct
Name: 113474065
Synonym: Tery_0159
Alternate gene names: NA
Gene position: 240062-241228 (Clockwise)
Preceding gene: 113474063
Following gene: 113474066
Centisome position: 3.1
GC content: 38.9
Gene sequence:
>1167_bases ATGATGGGGGAAATCTGCCAAGTTGGCGAAGAAATCTTAAAGCTACTCCTAGATGAATTTCAGCAGTCTACTCGTGGGTC AAGGCAAAATTGCCGAGAGGTGGCAGAACGTATTACACACGAAGTAGATAGGATTTGCACAGAAAGTAAAAGAATTCAAG CTTCGGGAGAAGTGGGTAAATGGGCTAAAAATTTAGCTCTACATCGCTTGAAACGATGTATACATTACTACCAGCTTCGT TCTCAAGAAGGAAGAATAGAATTACATAGCACCTTCAGCGCTATTATTTATAGATATATCACTCCTGCCCAAATACAATC AAGTTATCAGGCCAAATTAAATCTGATAGAAGATTTTTTACAACAATTTTACCTGGAAACTTTGAATGCTTTTCGGCGAG AAAGTGAACTACCAGCAACTTATCGTCCCCGTACTTTGTTAGAACTTGCAGAGTATATGGCCTTTACCGAACGTTATGGA AAGAGACGTATACCTTTATCTGGTGGTCGTAGTCAACAATTGATTATTTTACGGGCACAAACATTTTCCCAACAACAACC AAAGGAAACATTTGTAGATATTGACCAAGCAGCAGAAGGAACAACTACTGACTCAGATAAGACTTGGAACGATAGATCTA TCCAAGAAGTTCGAGAAGCAATGGTTGCACAAGACCCAGGTAATAATATTGCTTCTTTGCGTCAGGTTGTGATTGAAGAA CTAATGGCCTATCTAGAGGAACGTGAACAGAAAGACTGTGCAGATTACTTTGCATTGCGTTTACAAGATTTATCAACTGG AGAAATAGAATCTATCTTAGGTCTAACTCCCCGAGAAAGGGATTATTTACAGCAACGCTTTAAATACCATTTGCTCAAAT TTGCTATGGGACATCGTTGGGAACTGGTTCATCAATGGTTAGAAGCAGATTTAGAACAAAATTTAGGCTTAACTCCTACG GAGTGGGAAGCCTTGCATCACAAAATTGATTCAGAGCAAAAAAATTTGCTAAAATTAAAACAACAAGGTATTTCCGATGA TGTGATCGCGAAAACTTTAGGTCGTAAAATCAACCAGGTTAAGAAAAAGTGGTATAAATTACTCGAACTTGCCTGGGAAT TACGAAATCGTTCAGGTTCCGGAGCAGGGGCATCAAGTGATGAATAA
Upstream 100 bases:
>100_bases GTACATAATTTAGTGTTTTTCATATTCTCATAAATTATCTAAAAAGTTAGGTGTATTTGTGATGACTTATAAAGTTTATT AGTAGTTAATTATTAATACA
Downstream 100 bases:
>100_bases CGAAACGAACAAACAGGTGGAAATTTTTGAAAAAAATTTCTTTGATTGGCTTCTATCGAAGCCAAATTCTACAGAAATAT CAACAGTAATAGATAGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MMGEICQVGEEILKLLLDEFQQSTRGSRQNCREVAERITHEVDRICTESKRIQASGEVGKWAKNLALHRLKRCIHYYQLR SQEGRIELHSTFSAIIYRYITPAQIQSSYQAKLNLIEDFLQQFYLETLNAFRRESELPATYRPRTLLELAEYMAFTERYG KRRIPLSGGRSQQLIILRAQTFSQQQPKETFVDIDQAAEGTTTDSDKTWNDRSIQEVREAMVAQDPGNNIASLRQVVIEE LMAYLEEREQKDCADYFALRLQDLSTGEIESILGLTPRERDYLQQRFKYHLLKFAMGHRWELVHQWLEADLEQNLGLTPT EWEALHHKIDSEQKNLLKLKQQGISDDVIAKTLGRKINQVKKKWYKLLELAWELRNRSGSGAGASSDE
Sequences:
>Translated_388_residues MMGEICQVGEEILKLLLDEFQQSTRGSRQNCREVAERITHEVDRICTESKRIQASGEVGKWAKNLALHRLKRCIHYYQLR SQEGRIELHSTFSAIIYRYITPAQIQSSYQAKLNLIEDFLQQFYLETLNAFRRESELPATYRPRTLLELAEYMAFTERYG KRRIPLSGGRSQQLIILRAQTFSQQQPKETFVDIDQAAEGTTTDSDKTWNDRSIQEVREAMVAQDPGNNIASLRQVVIEE LMAYLEEREQKDCADYFALRLQDLSTGEIESILGLTPRERDYLQQRFKYHLLKFAMGHRWELVHQWLEADLEQNLGLTPT EWEALHHKIDSEQKNLLKLKQQGISDDVIAKTLGRKINQVKKKWYKLLELAWELRNRSGSGAGASSDE >Mature_388_residues MMGEICQVGEEILKLLLDEFQQSTRGSRQNCREVAERITHEVDRICTESKRIQASGEVGKWAKNLALHRLKRCIHYYQLR SQEGRIELHSTFSAIIYRYITPAQIQSSYQAKLNLIEDFLQQFYLETLNAFRRESELPATYRPRTLLELAEYMAFTERYG KRRIPLSGGRSQQLIILRAQTFSQQQPKETFVDIDQAAEGTTTDSDKTWNDRSIQEVREAMVAQDPGNNIASLRQVVIEE LMAYLEEREQKDCADYFALRLQDLSTGEIESILGLTPRERDYLQQRFKYHLLKFAMGHRWELVHQWLEADLEQNLGLTPT EWEALHHKIDSEQKNLLKLKQQGISDDVIAKTLGRKINQVKKKWYKLLELAWELRNRSGSGAGASSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45216; Mature: 45216
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGEICQVGEEILKLLLDEFQQSTRGSRQNCREVAERITHEVDRICTESKRIQASGEVGK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WAKNLALHRLKRCIHYYQLRSQEGRIELHSTFSAIIYRYITPAQIQSSYQAKLNLIEDFL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QQFYLETLNAFRRESELPATYRPRTLLELAEYMAFTERYGKRRIPLSGGRSQQLIILRAQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECH TFSQQQPKETFVDIDQAAEGTTTDSDKTWNDRSIQEVREAMVAQDPGNNIASLRQVVIEE HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LMAYLEEREQKDCADYFALRLQDLSTGEIESILGLTPRERDYLQQRFKYHLLKFAMGHRW HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH ELVHQWLEADLEQNLGLTPTEWEALHHKIDSEQKNLLKLKQQGISDDVIAKTLGRKINQV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KKKWYKLLELAWELRNRSGSGAGASSDE HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MMGEICQVGEEILKLLLDEFQQSTRGSRQNCREVAERITHEVDRICTESKRIQASGEVGK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WAKNLALHRLKRCIHYYQLRSQEGRIELHSTFSAIIYRYITPAQIQSSYQAKLNLIEDFL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QQFYLETLNAFRRESELPATYRPRTLLELAEYMAFTERYGKRRIPLSGGRSQQLIILRAQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECH TFSQQQPKETFVDIDQAAEGTTTDSDKTWNDRSIQEVREAMVAQDPGNNIASLRQVVIEE HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LMAYLEEREQKDCADYFALRLQDLSTGEIESILGLTPRERDYLQQRFKYHLLKFAMGHRW HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH ELVHQWLEADLEQNLGLTPTEWEALHHKIDSEQKNLLKLKQQGISDDVIAKTLGRKINQV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KKKWYKLLELAWELRNRSGSGAGASSDE HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA