Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474052

Identifier: 113474052

GI number: 113474052

Start: 212926

End: 214536

Strand: Reverse

Name: 113474052

Synonym: Tery_0145

Alternate gene names: NA

Gene position: 214536-212926 (Counterclockwise)

Preceding gene: 113474053

Following gene: 113474047

Centisome position: 2.77

GC content: 36.13

Gene sequence:

>1611_bases
ATGAAAAAAAAGATTTACAACTCCAAAGTTAGTTACATACAAGAGAAATCTCCTAAGGCTTTTCAAACAGTTGAGAAAAA
CTATTATCCTAGAACTAGAAAAGCTACACAAATTAGTCAAATTACCTCTACTACAAAATCTAGGAGACGTCGCAGACGAC
CATCTCAGTCTCAAAAACTTTCGTTGAAATTGCTATCTTTACCTTGGCGGAAATGGATAATTGAATGGATAGGAATTACT
TTGTTATTTGGTGGTTCTAGTTTAATGGCAGTGGGAGCATGGCTTAGTGTCAAGTTAATTTCTGATCCAAACGCTATGGT
CTTATTCAATCAAATATTACCACAATGGACTCAATTCTACATATCTGGGAATAAATCTTTAAAAACTCTTGAGCAAATTA
AATCTAATATTAAAGAAGAAGGGTTTAGCTCTGGAAAAACTTTTTCTCTTCCTAATAAAACAACAGATTCTAGTTCAGAT
CTATTAGTGCCAGTAATGAAGCAAATTGAATCTAGAGCATCTTTGCCCTGTGAAACTCCCTGTCGGGAAGTAGTAGAATT
GCGGGTCTATCAATCAGTTTTATCTGTTAATCAACGAGAAGGCAGTAAACCATATTTTCGATTAGTTAATAAATTACCAC
TAGAAGGTCCGGCTGAATCTTTTGTAATTGAATCTACTATTGAATCTGCTTCTGCTCTTCTAGGTTCAAATCAACCTTTA
CCTATAACAACAGTACGTCAGTTTCAAGGCAAAGTTCCTGCCTCAGGAGTTTGGTTTACTGTCAGTGGTCAGAGATTACA
AAATAATAAAGCTATTCCTTATGGGCAAATTATTAATTATAATCCCACTAGAAATTACTTAAGTTCCATGTTGGAGTGGA
AAAGTGCTGCTGGTCAAGCTCCGATCTGGCAGGAAATGACTGGTGGGGAAGATCCAGAACTAGTGATCGAGCAAACTGTG
GGGTTAGATCCTAATTTTGATATTTATTGGATTCAACCGCGAAAGTTTATACTTAATCCCATTGAGTTGGAGAAAATTTC
CCTTGATGAAACTCCTATTGGGGATGCATATTATAGAGATGCTCTGGGGTTAGCTCGTAATGGTTTATGGTCTCCTGCTT
TTCCTTTAATTGAACCTTTGCGAAAGAATTTAATAAATAAATCTAAATGGTCGAAAAAGGCACAAGCTCAGTTTGATTTG
ATTAAGTTTCATGCCAATATTACAGAAGCTCAGGCGATCGCCTCCTGGGCAAGCCCAAGTCAAAAAGTTTTAGCTGGTTT
AATAGATGGTCGTTGGCAACAAAGTCTAGATGTGTTTGAAAATAATTTGAGCAGCAATTATGATATTGCTAAATTACTGC
AAAATGATACTGGTCGTCTCCGCAAAAGAGTTGACGCAACTATTAAAGTAAATAGAGAGGAAATGAATGCGATAGCTTGG
GGTACTCTAATTGTCGCAAGTCAAAAAGGCCGAAAAAGGGCAATGTCATGGTTAAATAAACAACCATCTACTAGCAAACA
GGCAAAGGAAAAGATTGAAAAATTATTGGATCAACTAGATGCTGCTTTTGTAAAAGAGGAGAATATATACAAAAATCAAA
TTCAGCGATGA

Upstream 100 bases:

>100_bases
AGTTAAGACAAACGTTGTCAGAAAACGGGCGATCACTGGTAGAAACCGAGTATACTTGGAAAATTCAAGGTCAGCGGTAT
GAAAGGGTATTACTAGGATA

Downstream 100 bases:

>100_bases
GAGTTGTTACGGCAGAATTCAAAAGTCAGAATTTATAACGCAGAAGGTGGGAAGTTAAAGTTGTCCAATGAAATTGGAAT
AATTCCGAGAAAATAGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKKKIYNSKVSYIQEKSPKAFQTVEKNYYPRTRKATQISQITSTTKSRRRRRRPSQSQKLSLKLLSLPWRKWIIEWIGIT
LLFGGSSLMAVGAWLSVKLISDPNAMVLFNQILPQWTQFYISGNKSLKTLEQIKSNIKEEGFSSGKTFSLPNKTTDSSSD
LLVPVMKQIESRASLPCETPCREVVELRVYQSVLSVNQREGSKPYFRLVNKLPLEGPAESFVIESTIESASALLGSNQPL
PITTVRQFQGKVPASGVWFTVSGQRLQNNKAIPYGQIINYNPTRNYLSSMLEWKSAAGQAPIWQEMTGGEDPELVIEQTV
GLDPNFDIYWIQPRKFILNPIELEKISLDETPIGDAYYRDALGLARNGLWSPAFPLIEPLRKNLINKSKWSKKAQAQFDL
IKFHANITEAQAIASWASPSQKVLAGLIDGRWQQSLDVFENNLSSNYDIAKLLQNDTGRLRKRVDATIKVNREEMNAIAW
GTLIVASQKGRKRAMSWLNKQPSTSKQAKEKIEKLLDQLDAAFVKEENIYKNQIQR

Sequences:

>Translated_536_residues
MKKKIYNSKVSYIQEKSPKAFQTVEKNYYPRTRKATQISQITSTTKSRRRRRRPSQSQKLSLKLLSLPWRKWIIEWIGIT
LLFGGSSLMAVGAWLSVKLISDPNAMVLFNQILPQWTQFYISGNKSLKTLEQIKSNIKEEGFSSGKTFSLPNKTTDSSSD
LLVPVMKQIESRASLPCETPCREVVELRVYQSVLSVNQREGSKPYFRLVNKLPLEGPAESFVIESTIESASALLGSNQPL
PITTVRQFQGKVPASGVWFTVSGQRLQNNKAIPYGQIINYNPTRNYLSSMLEWKSAAGQAPIWQEMTGGEDPELVIEQTV
GLDPNFDIYWIQPRKFILNPIELEKISLDETPIGDAYYRDALGLARNGLWSPAFPLIEPLRKNLINKSKWSKKAQAQFDL
IKFHANITEAQAIASWASPSQKVLAGLIDGRWQQSLDVFENNLSSNYDIAKLLQNDTGRLRKRVDATIKVNREEMNAIAW
GTLIVASQKGRKRAMSWLNKQPSTSKQAKEKIEKLLDQLDAAFVKEENIYKNQIQR
>Mature_536_residues
MKKKIYNSKVSYIQEKSPKAFQTVEKNYYPRTRKATQISQITSTTKSRRRRRRPSQSQKLSLKLLSLPWRKWIIEWIGIT
LLFGGSSLMAVGAWLSVKLISDPNAMVLFNQILPQWTQFYISGNKSLKTLEQIKSNIKEEGFSSGKTFSLPNKTTDSSSD
LLVPVMKQIESRASLPCETPCREVVELRVYQSVLSVNQREGSKPYFRLVNKLPLEGPAESFVIESTIESASALLGSNQPL
PITTVRQFQGKVPASGVWFTVSGQRLQNNKAIPYGQIINYNPTRNYLSSMLEWKSAAGQAPIWQEMTGGEDPELVIEQTV
GLDPNFDIYWIQPRKFILNPIELEKISLDETPIGDAYYRDALGLARNGLWSPAFPLIEPLRKNLINKSKWSKKAQAQFDL
IKFHANITEAQAIASWASPSQKVLAGLIDGRWQQSLDVFENNLSSNYDIAKLLQNDTGRLRKRVDATIKVNREEMNAIAW
GTLIVASQKGRKRAMSWLNKQPSTSKQAKEKIEKLLDQLDAAFVKEENIYKNQIQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60863; Mature: 60863

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIYNSKVSYIQEKSPKAFQTVEKNYYPRTRKATQISQITSTTKSRRRRRRPSQSQKL
CCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
SLKLLSLPWRKWIIEWIGITLLFGGSSLMAVGAWLSVKLISDPNAMVLFNQILPQWTQFY
HHHHHHCCHHHHHHHHHHHHHEECCCHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHH
ISGNKSLKTLEQIKSNIKEEGFSSGKTFSLPNKTTDSSSDLLVPVMKQIESRASLPCETP
HCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
CREVVELRVYQSVLSVNQREGSKPYFRLVNKLPLEGPAESFVIESTIESASALLGSNQPL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PITTVRQFQGKVPASGVWFTVSGQRLQNNKAIPYGQIINYNPTRNYLSSMLEWKSAAGQA
CCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCC
PIWQEMTGGEDPELVIEQTVGLDPNFDIYWIQPRKFILNPIELEKISLDETPIGDAYYRD
CCHHHHCCCCCCCCHHHHHCCCCCCCCEEEECCHHHHCCCEEEEEEECCCCCCCHHHHHH
ALGLARNGLWSPAFPLIEPLRKNLINKSKWSKKAQAQFDLIKFHANITEAQAIASWASPS
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH
QKVLAGLIDGRWQQSLDVFENNLSSNYDIAKLLQNDTGRLRKRVDATIKVNREEMNAIAW
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCHHEEECHHHHHHHHH
GTLIVASQKGRKRAMSWLNKQPSTSKQAKEKIEKLLDQLDAAFVKEENIYKNQIQR
HEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MKKKIYNSKVSYIQEKSPKAFQTVEKNYYPRTRKATQISQITSTTKSRRRRRRPSQSQKL
CCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
SLKLLSLPWRKWIIEWIGITLLFGGSSLMAVGAWLSVKLISDPNAMVLFNQILPQWTQFY
HHHHHHCCHHHHHHHHHHHHHEECCCHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHH
ISGNKSLKTLEQIKSNIKEEGFSSGKTFSLPNKTTDSSSDLLVPVMKQIESRASLPCETP
HCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
CREVVELRVYQSVLSVNQREGSKPYFRLVNKLPLEGPAESFVIESTIESASALLGSNQPL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PITTVRQFQGKVPASGVWFTVSGQRLQNNKAIPYGQIINYNPTRNYLSSMLEWKSAAGQA
CCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCC
PIWQEMTGGEDPELVIEQTVGLDPNFDIYWIQPRKFILNPIELEKISLDETPIGDAYYRD
CCHHHHCCCCCCCCHHHHHCCCCCCCCEEEECCHHHHCCCEEEEEEECCCCCCCHHHHHH
ALGLARNGLWSPAFPLIEPLRKNLINKSKWSKKAQAQFDLIKFHANITEAQAIASWASPS
HHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH
QKVLAGLIDGRWQQSLDVFENNLSSNYDIAKLLQNDTGRLRKRVDATIKVNREEMNAIAW
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCHHEEECHHHHHHHHH
GTLIVASQKGRKRAMSWLNKQPSTSKQAKEKIEKLLDQLDAAFVKEENIYKNQIQR
HEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA