| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474017
Identifier: 113474017
GI number: 113474017
Start: 141415
End: 142320
Strand: Reverse
Name: 113474017
Synonym: Tery_0104
Alternate gene names: NA
Gene position: 142320-141415 (Counterclockwise)
Preceding gene: 113474020
Following gene: 113474016
Centisome position: 1.84
GC content: 39.07
Gene sequence:
>906_bases ATGGTTAGTAAACGCTCTAAACCCTGGATTCATCGTAATTCACGTTTTATTATTGCTGGTATTACAGCAGTAGGTGCTAC AATTACAGCTTATCTTACTATAGAAAAATTAACAGGGGGAACAGTTGTTTGCCCTGTGACTGGTTGTGATAAAGTCCTTG AAAGTCCCTACGCTATTGTTTTAGGCTTACCTTTAGCTCTGTTTGGCTTTTTAGCTTATGCTGGTATGGGAACAACAGCG ATCGCACCTTGGTTAATTAACCCAGATTCTCAAAAGGAATTACGCTCAAAACTAGAAAACTGGAGTTGGTTATTAATATT TGTAGGTAGCGTATCTATGACCATCTTCAGTAGCTACCTGATGTACATCATGGCATTTGAGATTAAATCTCTCTGTCTTT ACTGTATTAGTTCAGCTATTTGTTCCCTATCTCTACTTATCTTGGCACTAATTGGTCGTAATTGGGAAGATATTGGACAG TTAATCTTTACTGCTATTATTGTGGGGATGATTACTATCGTAGGAACATTTGCAGTTTATGCTCCAATTCATAGCCCCGC TGCTGAGAAACCAGGTGCTTCTGGGGTTACGACTACTTCTACTCCGACAAAAGTCGCATTAGCAGAACATTTAACAAAAG TAGGTGCAAAGATGTATGGTGCTTATTGGTGCAGTCATTGTCAGGATCAGAAGCAGTTATTTGGTAAAGAAGCTGTTAGT AAACTCAACTATATTGAGTGCGATCCTAAAGGCCAAAATTCTCAAACCCAGCTATGTGTGGCAGCAGGTATTAGGGCATA TCCAAGTTGGGATATTGACGGTCAGCTTGAGGAGGGTGTAATTTCTTTAGAGAATTTAGCCAAGTTATCTGGCTATCAAG GATCGATTAACTTTAATAATCCTTAA
Upstream 100 bases:
>100_bases ATAGATAAAATATTTTACTATAGAGCTCTCTAAATAGACTTTTCAGTTCACCCAGAGAGCCAATAGGATCAAGAGAAACT ACATTAAATAGGAGATACCA
Downstream 100 bases:
>100_bases TTAAGTGTTACTTAAAAAGCATGTATAGTTAAAAGAATAGTCAAAAGTAAGGATAAATAAAAATTATAGATAAAGCAGTG GGATATACTTGTCCCTTGAT
Product: vitamin K epoxide reductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MVSKRSKPWIHRNSRFIIAGITAVGATITAYLTIEKLTGGTVVCPVTGCDKVLESPYAIVLGLPLALFGFLAYAGMGTTA IAPWLINPDSQKELRSKLENWSWLLIFVGSVSMTIFSSYLMYIMAFEIKSLCLYCISSAICSLSLLILALIGRNWEDIGQ LIFTAIIVGMITIVGTFAVYAPIHSPAAEKPGASGVTTTSTPTKVALAEHLTKVGAKMYGAYWCSHCQDQKQLFGKEAVS KLNYIECDPKGQNSQTQLCVAAGIRAYPSWDIDGQLEEGVISLENLAKLSGYQGSINFNNP
Sequences:
>Translated_301_residues MVSKRSKPWIHRNSRFIIAGITAVGATITAYLTIEKLTGGTVVCPVTGCDKVLESPYAIVLGLPLALFGFLAYAGMGTTA IAPWLINPDSQKELRSKLENWSWLLIFVGSVSMTIFSSYLMYIMAFEIKSLCLYCISSAICSLSLLILALIGRNWEDIGQ LIFTAIIVGMITIVGTFAVYAPIHSPAAEKPGASGVTTTSTPTKVALAEHLTKVGAKMYGAYWCSHCQDQKQLFGKEAVS KLNYIECDPKGQNSQTQLCVAAGIRAYPSWDIDGQLEEGVISLENLAKLSGYQGSINFNNP >Mature_301_residues MVSKRSKPWIHRNSRFIIAGITAVGATITAYLTIEKLTGGTVVCPVTGCDKVLESPYAIVLGLPLALFGFLAYAGMGTTA IAPWLINPDSQKELRSKLENWSWLLIFVGSVSMTIFSSYLMYIMAFEIKSLCLYCISSAICSLSLLILALIGRNWEDIGQ LIFTAIIVGMITIVGTFAVYAPIHSPAAEKPGASGVTTTSTPTKVALAEHLTKVGAKMYGAYWCSHCQDQKQLFGKEAVS KLNYIECDPKGQNSQTQLCVAAGIRAYPSWDIDGQLEEGVISLENLAKLSGYQGSINFNNP
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32580; Mature: 32580
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKRSKPWIHRNSRFIIAGITAVGATITAYLTIEKLTGGTVVCPVTGCDKVLESPYAIV CCCCCCCCCEECCCEEEEEEHHHHHHHHEEEEEEEECCCCEEEEECCCHHHHHHCCHHHH LGLPLALFGFLAYAGMGTTAIAPWLINPDSQKELRSKLENWSWLLIFVGSVSMTIFSSYL HHHHHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHH MYIMAFEIKSLCLYCISSAICSLSLLILALIGRNWEDIGQLIFTAIIVGMITIVGTFAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APIHSPAAEKPGASGVTTTSTPTKVALAEHLTKVGAKMYGAYWCSHCQDQKQLFGKEAVS HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KLNYIECDPKGQNSQTQLCVAAGIRAYPSWDIDGQLEEGVISLENLAKLSGYQGSINFNN HCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC P C >Mature Secondary Structure MVSKRSKPWIHRNSRFIIAGITAVGATITAYLTIEKLTGGTVVCPVTGCDKVLESPYAIV CCCCCCCCCEECCCEEEEEEHHHHHHHHEEEEEEEECCCCEEEEECCCHHHHHHCCHHHH LGLPLALFGFLAYAGMGTTAIAPWLINPDSQKELRSKLENWSWLLIFVGSVSMTIFSSYL HHHHHHHHHHHHHHCCCHHHHCCEEECCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHH MYIMAFEIKSLCLYCISSAICSLSLLILALIGRNWEDIGQLIFTAIIVGMITIVGTFAVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APIHSPAAEKPGASGVTTTSTPTKVALAEHLTKVGAKMYGAYWCSHCQDQKQLFGKEAVS HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KLNYIECDPKGQNSQTQLCVAAGIRAYPSWDIDGQLEEGVISLENLAKLSGYQGSINFNN HCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA