| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is por [H]
Identifier: 113474020
GI number: 113474020
Start: 149231
End: 150202
Strand: Reverse
Name: por [H]
Synonym: Tery_0109
Alternate gene names: 113474020
Gene position: 150202-149231 (Counterclockwise)
Preceding gene: 113474021
Following gene: 113474017
Centisome position: 1.94
GC content: 38.79
Gene sequence:
>972_bases ATGAAAGAAAATCATAAATCAACAGTAGTAATTACAGGTGCATCCTCAGGGGTAGGTTTACACGCTGCAAAAGCTCTAGC TAAAACAGGTGAATGGTATGTTGTAATGGCCTGTCGAGACATCTCAAAAGCAGAAAAAGTTGCCCAAGAAGTAGGAATGA CACAAGACAGTTACACTGTTATGCACCTAGACTTGGCCAGTTTAGAAGTTGTAAAAAGGTTTGTCAAGACTTTTAGAGAA AGTGGTAGGTCTCTAGAAGCTTTAGTCTGCAATGCTGCAGTATATTTGCCATTATTAAAAGAACCGATGCGGAGTATAGA TGGATATGAAATAAGTGTTGCTACAAATCATCTTGGGCATTTTCTCCTCTGTAATTTGATGTTAGAGGATTTGAAAAAGT CTCCTGCTAAAGATAAAAGATTAGTAATTTTAGGAACTGTAACAGCTAACCCGAAAGAGTTAGGAGGAAAAATCCCGATT CCAGCACCTCCAGATTTAGGAAACTTGCAGGGCTTTGAACAGGGTTTCAAAACTCCTATTTCAATGATTAACGCTAAGAA ATTTAAGTCTGGCAAAGCTTACAAAGATAGCAAACTCTGTAATGTGTTGACAATGCGAGAGTTGCATCGGCGTTATTACA AATCAACGGGAATTGTTTTTAGTTCTCTGTATCCTGGATGTGTGGCAGATACACCTCTATTTCGAAATCATTATCCTTTA TTCCAAAAACTGTTCCCACTGTTTCAAAAGAACATTACTGGAGGATATGTTTCTCAAGATTTGGCAGGGGAAAGGGTTGC TGCTGTGGTTAAAGATCCTGAGTATAAGGAGTCTGGCATCTATTGGAGCTGGGGAAATCGTCAAAAGAAGGATCGTAAGT CTTTTGTACAAGAGGTTTCTGATGAAGCCAGTGATGATGATAAGGCAATTAAACTTTGGGAACTAAGTTCTAAGTTGGTA GGACTGAGTTAG
Upstream 100 bases:
>100_bases ATAAATTTATTCTAGTGATTCACATTTGATTTTTGATTTGGCTAAACCTGTTGTAAAATAAAGCAATTAGTCAATCGAAT TTTACAAAATATCATTGGGA
Downstream 100 bases:
>100_bases TTTTTTTTTAGGCGTTGCTGATGGGTGGATATGATTTGTATTTTTTAGTAATTGCCAAACTATTGAATAAAGTTATTTCA TCATTCAATTTTCATTTTCA
Product: protochlorophyllide oxidoreductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKENHKSTVVITGASSGVGLHAAKALAKTGEWYVVMACRDISKAEKVAQEVGMTQDSYTVMHLDLASLEVVKRFVKTFRE SGRSLEALVCNAAVYLPLLKEPMRSIDGYEISVATNHLGHFLLCNLMLEDLKKSPAKDKRLVILGTVTANPKELGGKIPI PAPPDLGNLQGFEQGFKTPISMINAKKFKSGKAYKDSKLCNVLTMRELHRRYYKSTGIVFSSLYPGCVADTPLFRNHYPL FQKLFPLFQKNITGGYVSQDLAGERVAAVVKDPEYKESGIYWSWGNRQKKDRKSFVQEVSDEASDDDKAIKLWELSSKLV GLS
Sequences:
>Translated_323_residues MKENHKSTVVITGASSGVGLHAAKALAKTGEWYVVMACRDISKAEKVAQEVGMTQDSYTVMHLDLASLEVVKRFVKTFRE SGRSLEALVCNAAVYLPLLKEPMRSIDGYEISVATNHLGHFLLCNLMLEDLKKSPAKDKRLVILGTVTANPKELGGKIPI PAPPDLGNLQGFEQGFKTPISMINAKKFKSGKAYKDSKLCNVLTMRELHRRYYKSTGIVFSSLYPGCVADTPLFRNHYPL FQKLFPLFQKNITGGYVSQDLAGERVAAVVKDPEYKESGIYWSWGNRQKKDRKSFVQEVSDEASDDDKAIKLWELSSKLV GLS >Mature_323_residues MKENHKSTVVITGASSGVGLHAAKALAKTGEWYVVMACRDISKAEKVAQEVGMTQDSYTVMHLDLASLEVVKRFVKTFRE SGRSLEALVCNAAVYLPLLKEPMRSIDGYEISVATNHLGHFLLCNLMLEDLKKSPAKDKRLVILGTVTANPKELGGKIPI PAPPDLGNLQGFEQGFKTPISMINAKKFKSGKAYKDSKLCNVLTMRELHRRYYKSTGIVFSSLYPGCVADTPLFRNHYPL FQKLFPLFQKNITGGYVSQDLAGERVAAVVKDPEYKESGIYWSWGNRQKKDRKSFVQEVSDEASDDDKAIKLWELSSKLV GLS
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI166795268, Length=320, Percent_Identity=31.25, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI7706523, Length=322, Percent_Identity=29.8136645962733, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI225579078, Length=324, Percent_Identity=32.0987654320988, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI186928839, Length=317, Percent_Identity=32.1766561514196, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI10190746, Length=337, Percent_Identity=31.1572700296736, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI146231950, Length=324, Percent_Identity=29.9382716049383, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI19923931, Length=291, Percent_Identity=30.5841924398625, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI193804850, Length=231, Percent_Identity=27.7056277056277, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17532791, Length=321, Percent_Identity=29.2834890965732, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI32565532, Length=238, Percent_Identity=31.0924369747899, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71992402, Length=304, Percent_Identity=27.6315789473684, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129347, Length=332, Percent_Identity=29.8192771084337, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24586328, Length=316, Percent_Identity=33.2278481012658, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI22024069, Length=319, Percent_Identity=31.974921630094, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI19921754, Length=326, Percent_Identity=30.9815950920245, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI45553409, Length=325, Percent_Identity=29.2307692307692, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI24647948, Length=325, Percent_Identity=29.2307692307692, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI24647946, Length=325, Percent_Identity=29.2307692307692, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573296, Length=319, Percent_Identity=30.0940438871473, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI161076371, Length=240, Percent_Identity=32.0833333333333, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24647931, Length=306, Percent_Identity=28.7581699346405, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45554248, Length=222, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640117, Length=222, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 35929; Mature: 35929
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENHKSTVVITGASSGVGLHAAKALAKTGEWYVVMACRDISKAEKVAQEVGMTQDSYTV CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEE MHLDLASLEVVKRFVKTFRESGRSLEALVCNAAVYLPLLKEPMRSIDGYEISVATNHLGH EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH FLLCNLMLEDLKKSPAKDKRLVILGTVTANPKELGGKIPIPAPPDLGNLQGFEQGFKTPI HHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SMINAKKFKSGKAYKDSKLCNVLTMRELHRRYYKSTGIVFSSLYPGCVADTPLFRNHYPL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH FQKLFPLFQKNITGGYVSQDLAGERVAAVVKDPEYKESGIYWSWGNRQKKDRKSFVQEVS HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHH DEASDDDKAIKLWELSSKLVGLS HCCCCCCCEEEEEEHHHHHCCCC >Mature Secondary Structure MKENHKSTVVITGASSGVGLHAAKALAKTGEWYVVMACRDISKAEKVAQEVGMTQDSYTV CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEE MHLDLASLEVVKRFVKTFRESGRSLEALVCNAAVYLPLLKEPMRSIDGYEISVATNHLGH EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH FLLCNLMLEDLKKSPAKDKRLVILGTVTANPKELGGKIPIPAPPDLGNLQGFEQGFKTPI HHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SMINAKKFKSGKAYKDSKLCNVLTMRELHRRYYKSTGIVFSSLYPGCVADTPLFRNHYPL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH FQKLFPLFQKNITGGYVSQDLAGERVAAVVKDPEYKESGIYWSWGNRQKKDRKSFVQEVS HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHH DEASDDDKAIKLWELSSKLVGLS HCCCCCCCEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]