Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474003

Identifier: 113474003

GI number: 113474003

Start: 115731

End: 115994

Strand: Reverse

Name: 113474003

Synonym: Tery_0084

Alternate gene names: NA

Gene position: 115994-115731 (Counterclockwise)

Preceding gene: 113474006

Following gene: 113474002

Centisome position: 1.5

GC content: 30.3

Gene sequence:

>264_bases
ATGCAATCCATAACTTTGGAAAAATTACTTTATGAAAGGCTGGAAAAGAACTTTTATGAGTATAAAACCCAAGCCCATCG
TAATTGGAAACAACTTTTAAATACACAATTAGAAACTATTGAAAGTCGAGCAATGAAAAATTTATTGCTGGAAAAGAACT
TTTATCAGTATAAAACCCAAGCCCATCGTAATTGGAAACAACCTTTAAATACACAATTAGAAACTATTGAAAGTCGAGCA
ATGAAAAATTTATTGCAGGTTTAG

Upstream 100 bases:

>100_bases
TAACAAATTTACTAGTAGTTTACAAAGCATTTTTTTGATCATATTTTGACTATAAATTTATAATTGTAGTTCAAGTCAGA
ATAACTTAATAGAAGTAAAT

Downstream 100 bases:

>100_bases
CAAAAATCAAAAATTTGATTCAAGATATTCCTAATATTAATCATCTTTCAGACTTTTTACAAGAACAAATTGGATAGCAA
TTATGGCCAGTTATAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MQSITLEKLLYERLEKNFYEYKTQAHRNWKQLLNTQLETIESRAMKNLLLEKNFYQYKTQAHRNWKQPLNTQLETIESRA
MKNLLQV

Sequences:

>Translated_87_residues
MQSITLEKLLYERLEKNFYEYKTQAHRNWKQLLNTQLETIESRAMKNLLLEKNFYQYKTQAHRNWKQPLNTQLETIESRA
MKNLLQV
>Mature_87_residues
MQSITLEKLLYERLEKNFYEYKTQAHRNWKQLLNTQLETIESRAMKNLLLEKNFYQYKTQAHRNWKQPLNTQLETIESRA
MKNLLQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10705; Mature: 10705

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSITLEKLLYERLEKNFYEYKTQAHRNWKQLLNTQLETIESRAMKNLLLEKNFYQYKTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRNWKQPLNTQLETIESRAMKNLLQV
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSITLEKLLYERLEKNFYEYKTQAHRNWKQLLNTQLETIESRAMKNLLLEKNFYQYKTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRNWKQPLNTQLETIESRAMKNLLQV
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA