| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474002
Identifier: 113474002
GI number: 113474002
Start: 113289
End: 115082
Strand: Reverse
Name: 113474002
Synonym: Tery_0082
Alternate gene names: NA
Gene position: 115082-113289 (Counterclockwise)
Preceding gene: 113474003
Following gene: 113474001
Centisome position: 1.48
GC content: 31.94
Gene sequence:
>1794_bases ATGTTCCATCCTGATCCAGAATTGTTTGAAAATCCCAGAAATTATTATCTTAATCCCTGGATTTTTGGTATCTTAATTAT TGTTGTTGTTTTCCTATTTATAATTATGTATTCTCTAGAATATCAATCCAAATTTTTAACAGACCCATTTCTCCAAGTTC CCACAAAAAATTCCATACAAGTTGTTTGGTTTACTGAATTTCCTGGCAAACGTAATCTTGTTGTTTATGGTGAAAACTTG AATCAAGTTGTTGAAGCAAATACTACTAAACTTAGTCGTACTCGTGAAGACCAAGATTCTTTTGTCGGAAAACAAACAGA AAAAGGCTTAATTTATCAACAACCTATTGTACGAAATATCTGGCGACATGAAGCCAAAGTTATTGGTTTAACTCCTAATA ATTATGTGCCATACCGAGTTATTAGTGAAAGAGAAAATGGGGAAAATATAAAAAGTAAAATTTTTCATCTTGCTCCTAAA CCAACCCCAGGTACACCTTTAAAAATTCTCCTAACTTCCGATCATCAATTAAAACCAATGAGTTCAGCAAATCTCCAAAA AGTAACAGAAACTTTTGATAAATTAGACGCTATTTTTTTTGCTGGAGATTTAGTTAATATTCCCGACCGTGCCTCAGAAT GGTTTGACGATAATCGAGGAAATGCTTTTTTTCCAAATCTCCAAGGTAGGGCAAATTATGAATTAGAAAAAAATGGCAAA AAAACTATTTATAAAGGTGGTAAATTAATCCAAAATATGCCTCTATTTCCAGCAATTGGAAACCATGAAGTTATGGGAAT ATTTTCCATGGAAACTTCTTTGAACTATCAATTTAGTCAGTCATATCCCAGGCAAGCTGCCAAAGATTTATATAAACAAA ACCCACAAAAATTTCAAAATATTAGCCCTGATACCTGGCTAAAAAATAATTCTTTTAATACAGAAACTTACCAAGAAATT TTTAGTCTGCCTCAAAATAGTTCAGAGAAAAAAAATTATTATGCCCTGACTTTTGGTGATATATATTTAGTAGCTTTATA TATCACAAATATGTGGCGAGTGCCCCATTTAAAGGATAATGCTAGAGGCAAATATCGGGAAAGAAAACAGGATTTTAATA ATCCCGCTGAATGGGGTTACGGTCAGCATATTTTTGAACCTATTATTAAAGGTAGCGAACAATATAATTGGCTAGAAAAA GAACTAGCAAGTCAGGAATTTAAACAAGCAAAATATAAAATAGTTATGTTTCATCATCCGCCTCATTCTCTTGGCGAAAA TATTATTCCTGCTTATACTAATCCTATCCAATATATTGACAGAGATAAAAATGGTAAAATTACCATGATTCGTTATGAAT ATCCCCAACAAAACGACTATATTATTCGAGATGTTTTACCATTATTAGAAACTGCTGGTGTACAGTTAGTATTTTACGGG CATTCTCATCTTTGGAATCGTTTTATTAGTCCTGGTGGAATGCATTTTCTAGAAACATCAAATGTGGGTAATAGTTATGG AGCTTATTTAGGAAATACAAAGCGCAATATTCCTCTAAATTATCAGGAAAAATATCCTGAAGTTGGTAATCCTAATGGTT TAGAAGCAATAATTCCAACTATTGCTCCTTTACTAGATGAAAATGGTAGAAATCAGGCTTTTATTGCTAGTAATGATATT ACAGCTTTTAGTATTTTTGACACAGAGACAGGAAAAGTTAGTAGTTACTATTTTGACACTAGAAAACCTAATTCTGACGT CGTAAAATTTGATGAATTTCAGCTTCAAAAATAA
Upstream 100 bases:
>100_bases TATGAAAGAGTAATTCAAGATAATTTTGAAAATTATATTCAATCTAATTAAAATATTGAAAATATAGAGAAAATCATCAT TATAATTATTTATTATTTCT
Downstream 100 bases:
>100_bases ATATAAATTCAGTTTGTCAGACATTTTTTAATTCCAAAAATCAGCTAAATTAACTTTAACAAAACTAGCTAAAGCACAAC TAAAAACACGATAAAGAATG
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MFHPDPELFENPRNYYLNPWIFGILIIVVVFLFIIMYSLEYQSKFLTDPFLQVPTKNSIQVVWFTEFPGKRNLVVYGENL NQVVEANTTKLSRTREDQDSFVGKQTEKGLIYQQPIVRNIWRHEAKVIGLTPNNYVPYRVISERENGENIKSKIFHLAPK PTPGTPLKILLTSDHQLKPMSSANLQKVTETFDKLDAIFFAGDLVNIPDRASEWFDDNRGNAFFPNLQGRANYELEKNGK KTIYKGGKLIQNMPLFPAIGNHEVMGIFSMETSLNYQFSQSYPRQAAKDLYKQNPQKFQNISPDTWLKNNSFNTETYQEI FSLPQNSSEKKNYYALTFGDIYLVALYITNMWRVPHLKDNARGKYRERKQDFNNPAEWGYGQHIFEPIIKGSEQYNWLEK ELASQEFKQAKYKIVMFHHPPHSLGENIIPAYTNPIQYIDRDKNGKITMIRYEYPQQNDYIIRDVLPLLETAGVQLVFYG HSHLWNRFISPGGMHFLETSNVGNSYGAYLGNTKRNIPLNYQEKYPEVGNPNGLEAIIPTIAPLLDENGRNQAFIASNDI TAFSIFDTETGKVSSYYFDTRKPNSDVVKFDEFQLQK
Sequences:
>Translated_597_residues MFHPDPELFENPRNYYLNPWIFGILIIVVVFLFIIMYSLEYQSKFLTDPFLQVPTKNSIQVVWFTEFPGKRNLVVYGENL NQVVEANTTKLSRTREDQDSFVGKQTEKGLIYQQPIVRNIWRHEAKVIGLTPNNYVPYRVISERENGENIKSKIFHLAPK PTPGTPLKILLTSDHQLKPMSSANLQKVTETFDKLDAIFFAGDLVNIPDRASEWFDDNRGNAFFPNLQGRANYELEKNGK KTIYKGGKLIQNMPLFPAIGNHEVMGIFSMETSLNYQFSQSYPRQAAKDLYKQNPQKFQNISPDTWLKNNSFNTETYQEI FSLPQNSSEKKNYYALTFGDIYLVALYITNMWRVPHLKDNARGKYRERKQDFNNPAEWGYGQHIFEPIIKGSEQYNWLEK ELASQEFKQAKYKIVMFHHPPHSLGENIIPAYTNPIQYIDRDKNGKITMIRYEYPQQNDYIIRDVLPLLETAGVQLVFYG HSHLWNRFISPGGMHFLETSNVGNSYGAYLGNTKRNIPLNYQEKYPEVGNPNGLEAIIPTIAPLLDENGRNQAFIASNDI TAFSIFDTETGKVSSYYFDTRKPNSDVVKFDEFQLQK >Mature_597_residues MFHPDPELFENPRNYYLNPWIFGILIIVVVFLFIIMYSLEYQSKFLTDPFLQVPTKNSIQVVWFTEFPGKRNLVVYGENL NQVVEANTTKLSRTREDQDSFVGKQTEKGLIYQQPIVRNIWRHEAKVIGLTPNNYVPYRVISERENGENIKSKIFHLAPK PTPGTPLKILLTSDHQLKPMSSANLQKVTETFDKLDAIFFAGDLVNIPDRASEWFDDNRGNAFFPNLQGRANYELEKNGK KTIYKGGKLIQNMPLFPAIGNHEVMGIFSMETSLNYQFSQSYPRQAAKDLYKQNPQKFQNISPDTWLKNNSFNTETYQEI FSLPQNSSEKKNYYALTFGDIYLVALYITNMWRVPHLKDNARGKYRERKQDFNNPAEWGYGQHIFEPIIKGSEQYNWLEK ELASQEFKQAKYKIVMFHHPPHSLGENIIPAYTNPIQYIDRDKNGKITMIRYEYPQQNDYIIRDVLPLLETAGVQLVFYG HSHLWNRFISPGGMHFLETSNVGNSYGAYLGNTKRNIPLNYQEKYPEVGNPNGLEAIIPTIAPLLDENGRNQAFIASNDI TAFSIFDTETGKVSSYYFDTRKPNSDVVKFDEFQLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69257; Mature: 69257
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHPDPELFENPRNYYLNPWIFGILIIVVVFLFIIMYSLEYQSKFLTDPFLQVPTKNSIQ CCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEE VVWFTEFPGKRNLVVYGENLNQVVEANTTKLSRTREDQDSFVGKQTEKGLIYQQPIVRNI EEEEECCCCCCEEEEECCCCHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCEECCHHHHHH WRHEAKVIGLTPNNYVPYRVISERENGENIKSKIFHLAPKPTPGTPLKILLTSDHQLKPM HHCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHEECCCCCCCCCCEEEEEECCCCCCCC SSANLQKVTETFDKLDAIFFAGDLVNIPDRASEWFDDNRGNAFFPNLQGRANYELEKNGK CCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCEECCCCC KTIYKGGKLIQNMPLFPAIGNHEVMGIFSMETSLNYQFSQSYPRQAAKDLYKQNPQKFQN EEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHCCHHHHHHHHHHCCCHHHHC ISPDTWLKNNSFNTETYQEIFSLPQNSSEKKNYYALTFGDIYLVALYITNMWRVPHLKDN CCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC ARGKYRERKQDFNNPAEWGYGQHIFEPIIKGSEQYNWLEKELASQEFKQAKYKIVMFHHP CCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC PHSLGENIIPAYTNPIQYIDRDKNGKITMIRYEYPQQNDYIIRDVLPLLETAGVQLVFYG CHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEEEC HSHLWNRFISPGGMHFLETSNVGNSYGAYLGNTKRNIPLNYQEKYPEVGNPNGLEAIIPT CHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH IAPLLDENGRNQAFIASNDITAFSIFDTETGKVSSYYFDTRKPNSDVVKFDEFQLQK HHHHHCCCCCCEEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCEECCC >Mature Secondary Structure MFHPDPELFENPRNYYLNPWIFGILIIVVVFLFIIMYSLEYQSKFLTDPFLQVPTKNSIQ CCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEE VVWFTEFPGKRNLVVYGENLNQVVEANTTKLSRTREDQDSFVGKQTEKGLIYQQPIVRNI EEEEECCCCCCEEEEECCCCHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCEECCHHHHHH WRHEAKVIGLTPNNYVPYRVISERENGENIKSKIFHLAPKPTPGTPLKILLTSDHQLKPM HHCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHEECCCCCCCCCCEEEEEECCCCCCCC SSANLQKVTETFDKLDAIFFAGDLVNIPDRASEWFDDNRGNAFFPNLQGRANYELEKNGK CCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCEECCCCC KTIYKGGKLIQNMPLFPAIGNHEVMGIFSMETSLNYQFSQSYPRQAAKDLYKQNPQKFQN EEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHCCHHHHHHHHHHCCCHHHHC ISPDTWLKNNSFNTETYQEIFSLPQNSSEKKNYYALTFGDIYLVALYITNMWRVPHLKDN CCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC ARGKYRERKQDFNNPAEWGYGQHIFEPIIKGSEQYNWLEKELASQEFKQAKYKIVMFHHP CCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC PHSLGENIIPAYTNPIQYIDRDKNGKITMIRYEYPQQNDYIIRDVLPLLETAGVQLVFYG CHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEEEC HSHLWNRFISPGGMHFLETSNVGNSYGAYLGNTKRNIPLNYQEKYPEVGNPNGLEAIIPT CHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH IAPLLDENGRNQAFIASNDITAFSIFDTETGKVSSYYFDTRKPNSDVVKFDEFQLQK HHHHHCCCCCCEEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA