Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113473958

Identifier: 113473958

GI number: 113473958

Start: 36830

End: 38158

Strand: Direct

Name: 113473958

Synonym: Tery_0022

Alternate gene names: NA

Gene position: 36830-38158 (Clockwise)

Preceding gene: 113473957

Following gene: 113473959

Centisome position: 0.48

GC content: 28.37

Gene sequence:

>1329_bases
TTGCCTCATACTAATCAAACTGAAAGAAAGTACTATTCCCATTATTCTGATGATCAAATTAGGCAAATAGTGGTAGAAAA
ATATAAAACTTGTCTAGAAAAGTTTGGGTATTTATTTGAATTAGAAATTAAATATAAATTTGATAAAAATTATCAGATAA
AAATATCTATTCCCATTTATAAAAAGTTTATGGTTCCAGTGATTAATAATTTCATTTCAAAAGCTAATAAATTAAAAAAA
GAGGAGAAGCTAGATGAAGCGATCGCTCTTTACAAACAAGCTATAGAATTAAATCCCGGTTTTCCTTGGTATTACTATGA
ACTAGGAGAAACTTTAACAGAAAAAGGAGATTTAGATGAAGCAATAGCTCAGTTTTTTCAAGCTACTAAAATTAATCCTA
ACTCTGCCTGGTTTTGTTATGAACTGGCAAAAGCTTTACAAAAAAAAGGTGAGTTAAATCAGGCAATTAATTATTATAGA
CAAGCTATTGAAAGTAACCCAGACTTTTATGGATTTTACAATAGTCTAGGTTGTTGCTTTTTCCAGAATAAAAATTATCA
TCAAGCTATAATTAATTTTTTAATCGCACTGGAATTAAACTCCAGTTCAGTAATTAGCTACGAATATTTATATCAAGTAT
ACTTACAACTTGGTTTGACTAAAAAATGTATTGATAATTTGTTTGGTAGATTTAAACAACCTAGTCAAAAACCTACTTTA
ACTATTCGCATAAAAGAAAAATCTGTCAATTCAAAACAGGAATTATCGAAAACAAAAATATTTGGAATTGGTTTAGGAAA
AACAGGTACCACAACTTTGGGAGCTTGCTTAAATAATCTTGGATATAAACACTATGGTTGGTATACTTTGACTAATCACA
AACTGCTTTACCAAATTAAATTAGATAATTTTGATGATGTTCATAGAGTAGTCAATCAATATGATTGTTTTGAAGATTAT
CCGTGGCCTTTGATTTACAAATGGCTCGATCAAAAATACCCTAATAGTAAATTTATATTAACCATAAGGAAATGTTCTCA
AACTTGGTTTAAAAGTTGTTTAAATCATTATTTTCGACTACAAGATAGAGCAGCTTATCTCTATGATTTAATCTATGGTT
TAGGTCATCCACAGAATTGTTCAGATGAGTATATAAATTTTTACGAAAGTCATAATCAACAAGTTATTGATTACTTTCAA
AGTAAACCGGATAAATTACTGATAATTTGTTGGGAAAAAGGAGATAGTTGGGATAAATTATGTGGTTTTCTCGGAAAAAC
AGTTCCTGAAATTCTTTTGCCTCATTTGATGAAAAGTCAAACTAATTAA

Upstream 100 bases:

>100_bases
TGGGTAAATATTAGTAGATTATACCTATATATTTGATAAATTAAAGTTAGATTTTTAGAAAGTTATATGAAATCTTGATC
TAAATCCTTGGCTATTTGAA

Downstream 100 bases:

>100_bases
TCAAGGATATATTTTTAATAAAATTGCTACAGGAGATTTAATGATGCAGGGAGATTAACTCAAATATGAGGGAAAGTTAG
ATTCGCGTTTCGCTGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Sulfotransferase; Peptidase; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Sel1 Repeat Family; TPR Domain Containing Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Protein With TPR Motifs

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MPHTNQTERKYYSHYSDDQIRQIVVEKYKTCLEKFGYLFELEIKYKFDKNYQIKISIPIYKKFMVPVINNFISKANKLKK
EEKLDEAIALYKQAIELNPGFPWYYYELGETLTEKGDLDEAIAQFFQATKINPNSAWFCYELAKALQKKGELNQAINYYR
QAIESNPDFYGFYNSLGCCFFQNKNYHQAIINFLIALELNSSSVISYEYLYQVYLQLGLTKKCIDNLFGRFKQPSQKPTL
TIRIKEKSVNSKQELSKTKIFGIGLGKTGTTTLGACLNNLGYKHYGWYTLTNHKLLYQIKLDNFDDVHRVVNQYDCFEDY
PWPLIYKWLDQKYPNSKFILTIRKCSQTWFKSCLNHYFRLQDRAAYLYDLIYGLGHPQNCSDEYINFYESHNQQVIDYFQ
SKPDKLLIICWEKGDSWDKLCGFLGKTVPEILLPHLMKSQTN

Sequences:

>Translated_442_residues
MPHTNQTERKYYSHYSDDQIRQIVVEKYKTCLEKFGYLFELEIKYKFDKNYQIKISIPIYKKFMVPVINNFISKANKLKK
EEKLDEAIALYKQAIELNPGFPWYYYELGETLTEKGDLDEAIAQFFQATKINPNSAWFCYELAKALQKKGELNQAINYYR
QAIESNPDFYGFYNSLGCCFFQNKNYHQAIINFLIALELNSSSVISYEYLYQVYLQLGLTKKCIDNLFGRFKQPSQKPTL
TIRIKEKSVNSKQELSKTKIFGIGLGKTGTTTLGACLNNLGYKHYGWYTLTNHKLLYQIKLDNFDDVHRVVNQYDCFEDY
PWPLIYKWLDQKYPNSKFILTIRKCSQTWFKSCLNHYFRLQDRAAYLYDLIYGLGHPQNCSDEYINFYESHNQQVIDYFQ
SKPDKLLIICWEKGDSWDKLCGFLGKTVPEILLPHLMKSQTN
>Mature_441_residues
PHTNQTERKYYSHYSDDQIRQIVVEKYKTCLEKFGYLFELEIKYKFDKNYQIKISIPIYKKFMVPVINNFISKANKLKKE
EKLDEAIALYKQAIELNPGFPWYYYELGETLTEKGDLDEAIAQFFQATKINPNSAWFCYELAKALQKKGELNQAINYYRQ
AIESNPDFYGFYNSLGCCFFQNKNYHQAIINFLIALELNSSSVISYEYLYQVYLQLGLTKKCIDNLFGRFKQPSQKPTLT
IRIKEKSVNSKQELSKTKIFGIGLGKTGTTTLGACLNNLGYKHYGWYTLTNHKLLYQIKLDNFDDVHRVVNQYDCFEDYP
WPLIYKWLDQKYPNSKFILTIRKCSQTWFKSCLNHYFRLQDRAAYLYDLIYGLGHPQNCSDEYINFYESHNQQVIDYFQS
KPDKLLIICWEKGDSWDKLCGFLGKTVPEILLPHLMKSQTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=158, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI32307150, Length=158, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=151, Percent_Identity=31.7880794701987, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=135, Percent_Identity=32.5925925925926, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17647755, Length=158, Percent_Identity=27.2151898734177, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585827, Length=158, Percent_Identity=27.2151898734177, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585829, Length=158, Percent_Identity=27.2151898734177, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52283; Mature: 52152

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTNQTERKYYSHYSDDQIRQIVVEKYKTCLEKFGYLFELEIKYKFDKNYQIKISIPIY
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCHH
KKFMVPVINNFISKANKLKKEEKLDEAIALYKQAIELNPGFPWYYYELGETLTEKGDLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
AIAQFFQATKINPNSAWFCYELAKALQKKGELNQAINYYRQAIESNPDFYGFYNSLGCCF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHCCCEEE
FQNKNYHQAIINFLIALELNSSSVISYEYLYQVYLQLGLTKKCIDNLFGRFKQPSQKPTL
ECCCCHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEE
TIRIKEKSVNSKQELSKTKIFGIGLGKTGTTTLGACLNNLGYKHYGWYTLTNHKLLYQIK
EEEEECCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEECEEEEECCEEEEEEE
LDNFDDVHRVVNQYDCFEDYPWPLIYKWLDQKYPNSKFILTIRKCSQTWFKSCLNHYFRL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
QDRAAYLYDLIYGLGHPQNCSDEYINFYESHNQQVIDYFQSKPDKLLIICWEKGDSWDKL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHH
CGFLGKTVPEILLPHLMKSQTN
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHTNQTERKYYSHYSDDQIRQIVVEKYKTCLEKFGYLFELEIKYKFDKNYQIKISIPIY
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCHH
KKFMVPVINNFISKANKLKKEEKLDEAIALYKQAIELNPGFPWYYYELGETLTEKGDLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
AIAQFFQATKINPNSAWFCYELAKALQKKGELNQAINYYRQAIESNPDFYGFYNSLGCCF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHCCCEEE
FQNKNYHQAIINFLIALELNSSSVISYEYLYQVYLQLGLTKKCIDNLFGRFKQPSQKPTL
ECCCCHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEE
TIRIKEKSVNSKQELSKTKIFGIGLGKTGTTTLGACLNNLGYKHYGWYTLTNHKLLYQIK
EEEEECCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEECEEEEECCEEEEEEE
LDNFDDVHRVVNQYDCFEDYPWPLIYKWLDQKYPNSKFILTIRKCSQTWFKSCLNHYFRL
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
QDRAAYLYDLIYGLGHPQNCSDEYINFYESHNQQVIDYFQSKPDKLLIICWEKGDSWDKL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHH
CGFLGKTVPEILLPHLMKSQTN
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA