Click here to switch to the map view.

The map label for this gene is 113473952

Identifier: 113473952

GI number: 113473952

Start: 23799

End: 24329

Strand: Reverse

Name: 113473952

Synonym: Tery_0015

Alternate gene names: NA

Gene position: 24329-23799 (Counterclockwise)

Preceding gene: 113473953

Following gene: 113473951

Centisome position: 0.31

GC content: 29.0

Gene sequence:

>531_bases
TTGCCTTTGTTAGAATTGACTTTAACACAACTATGGAACAAACAAACTAATGCTAAATTAACTCACAATATTTATGAAGA
AATTGGTGGTGTAAAAAAATCAATTGCTAACCATGCAAAGGAGGTATATGAACAGTTAAATGATGAGAAGCGAAAAAAGT
TAGAGCAAATTTTTATTCAATTAATTAATCTAGAAAACTTAAAAGCATATACTCTTCGGGTGAAAAATTATACTAATTTA
GGAGAAGATAACTGGGAATTAATAACTTACCTTAATAGTGAAAATATTAGCTTAGTTATAATCAACTATAACTTACGAAA
AATCCTAAGAGACAATGGAAGTAATTTATCAGAGCCTAATCTTGAAGAGGATAAATTCAACTCTGCTCATGCACCAAAAG
CTCAATTTCAAGTTGCTGATATTTCAAAAGCAGATTTATCAAATGCAAATTTAGATGGAACAAATTTTTCGAGAGCTAAA
CTCAATGAAGCTAATTTCAGTAAAGCTTATATGCCAAACGTTAATTGCTAA

Upstream 100 bases:

>100_bases
AAGTTTGTATAGATAAGGATAAATGCTTCTTACGTCTAGTAATCAAGTATTGCTGAATAGTTTGATAATTTATGGGAATC
TTAATAATAAAGCTTAAAAT

Downstream 100 bases:

>100_bases
AATATGGACCTCTTGCAGGCTGACTTTAGGAGCATTCAAGCTCTGACTATTGAGCAAGTTAAGTCTGCTCAAAATTGAGA
TAAAGCTTTATATGATGAAG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: WD Repeat-Containing Protein; WD40 Repeat Subgroup; Pentapeptide Repeat-Containing Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPLLELTLTQLWNKQTNAKLTHNIYEEIGGVKKSIANHAKEVYEQLNDEKRKKLEQIFIQLINLENLKAYTLRVKNYTNL
GEDNWELITYLNSENISLVIINYNLRKILRDNGSNLSEPNLEEDKFNSAHAPKAQFQVADISKADLSNANLDGTNFSRAK
LNEANFSKAYMPNVNC

Sequences:

>Translated_176_residues
MPLLELTLTQLWNKQTNAKLTHNIYEEIGGVKKSIANHAKEVYEQLNDEKRKKLEQIFIQLINLENLKAYTLRVKNYTNL
GEDNWELITYLNSENISLVIINYNLRKILRDNGSNLSEPNLEEDKFNSAHAPKAQFQVADISKADLSNANLDGTNFSRAK
LNEANFSKAYMPNVNC
>Mature_175_residues
PLLELTLTQLWNKQTNAKLTHNIYEEIGGVKKSIANHAKEVYEQLNDEKRKKLEQIFIQLINLENLKAYTLRVKNYTNLG
EDNWELITYLNSENISLVIINYNLRKILRDNGSNLSEPNLEEDKFNSAHAPKAQFQVADISKADLSNANLDGTNFSRAKL
NEANFSKAYMPNVNC

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20202; Mature: 20071

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLELTLTQLWNKQTNAKLTHNIYEEIGGVKKSIANHAKEVYEQLNDEKRKKLEQIFIQ
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LINLENLKAYTLRVKNYTNLGEDNWELITYLNSENISLVIINYNLRKILRDNGSNLSEPN
HHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCC
LEEDKFNSAHAPKAQFQVADISKADLSNANLDGTNFSRAKLNEANFSKAYMPNVNC
CCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLLELTLTQLWNKQTNAKLTHNIYEEIGGVKKSIANHAKEVYEQLNDEKRKKLEQIFIQ
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LINLENLKAYTLRVKNYTNLGEDNWELITYLNSENISLVIINYNLRKILRDNGSNLSEPN
HHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCC
LEEDKFNSAHAPKAQFQVADISKADLSNANLDGTNFSRAKLNEANFSKAYMPNVNC
CCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA