| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473951
Identifier: 113473951
GI number: 113473951
Start: 22680
End: 23072
Strand: Reverse
Name: 113473951
Synonym: Tery_0014
Alternate gene names: NA
Gene position: 23072-22680 (Counterclockwise)
Preceding gene: 113473952
Following gene: 113473950
Centisome position: 0.3
GC content: 35.62
Gene sequence:
>393_bases ATGGATATTATTTCAAGACTTAAACAAGATTATCAAAAATTTCCTGCTGACCAAACTTATAGTATTTACGCAGAAAATGT TTACTTTGAAGATCCACTAAATAAATTTCGAGGCATAGAGCGTTATCAAAAAATGATCGGTTTTATGAACAATTGGTTTA ATGATATTAAACTTGACTTGCACGATATTAGTCAGTCAGGAAATGTGATTAAAACTCGTTGGACACTTAGCTGGACCGCC CCTGTCCCCTGGAAACCTCCAATGGCAATTCCAGGATGGAGTGAATTAAAACTGAATGCAGATGGACTAATTAACAGTCA TATTGACTATTGGGATATCTCTCGACTGGACGTTTTAAAACAGCTTTTTCAACTAAGATCCTTCCCTGTGTAA
Upstream 100 bases:
>100_bases ATAAGCAGGTATGTGTAATTAATTTTGCATAACTACTTAAAGAAAATACTCAATAATTTTTTAATTTAACAAGGAAGAAA AAGAGAAGGTAAGAAACAAA
Downstream 100 bases:
>100_bases AGGCGCGATGATTAATACTAAGCAGCTCTGGTATTGGGTGGTTTGAGGCTTCACATATTGACAATAATTAATATAATTAA GATCTATTCTTCGGTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDIISRLKQDYQKFPADQTYSIYAENVYFEDPLNKFRGIERYQKMIGFMNNWFNDIKLDLHDISQSGNVIKTRWTLSWTA PVPWKPPMAIPGWSELKLNADGLINSHIDYWDISRLDVLKQLFQLRSFPV
Sequences:
>Translated_130_residues MDIISRLKQDYQKFPADQTYSIYAENVYFEDPLNKFRGIERYQKMIGFMNNWFNDIKLDLHDISQSGNVIKTRWTLSWTA PVPWKPPMAIPGWSELKLNADGLINSHIDYWDISRLDVLKQLFQLRSFPV >Mature_130_residues MDIISRLKQDYQKFPADQTYSIYAENVYFEDPLNKFRGIERYQKMIGFMNNWFNDIKLDLHDISQSGNVIKTRWTLSWTA PVPWKPPMAIPGWSELKLNADGLINSHIDYWDISRLDVLKQLFQLRSFPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15444; Mature: 15444
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIISRLKQDYQKFPADQTYSIYAENVYFEDPLNKFRGIERYQKMIGFMNNWFNDIKLDL CCHHHHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDISQSGNVIKTRWTLSWTAPVPWKPPMAIPGWSELKLNADGLINSHIDYWDISRLDVLK HHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHH QLFQLRSFPV HHHHHHCCCC >Mature Secondary Structure MDIISRLKQDYQKFPADQTYSIYAENVYFEDPLNKFRGIERYQKMIGFMNNWFNDIKLDL CCHHHHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDISQSGNVIKTRWTLSWTAPVPWKPPMAIPGWSELKLNADGLINSHIDYWDISRLDVLK HHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHH QLFQLRSFPV HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA