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The map label for this gene is cspG [H]

Identifier: 110835605

GI number: 110835605

Start: 3105207

End: 3105410

Strand: Direct

Name: cspG [H]

Synonym: ABO_2744

Alternate gene names: 110835605

Gene position: 3105207-3105410 (Clockwise)

Preceding gene: 110835604

Following gene: 110835612

Centisome position: 99.52

GC content: 50.98

Gene sequence:

>204_bases
ATGGCTACAGGTACTGTGAAGTGGTTTAACGAGTCCAAGGGTTTTGGCTTCATTTCCCAGGACGATGGTGGTGCGGACGT
GTTCGTTCATTTCAGTGCAATTACCGGCTCAGGCTTCAAAACCCTGGCTGAGGGTCAGAAGGTTTCCTTCGAGATCCAGC
AGGGCCCAAAAGGTCCACAGGCTGCTAACGTTGTTGCTGAATAA

Upstream 100 bases:

>100_bases
TAGTTGTCTTCCCTGCGTGAAGCTGAAGTTGTCTCCGAACACCGCTCAACATGGTTTGCAAGCAACACCCTAAGTAATAG
TTTTTGAGGTATATATTCAC

Downstream 100 bases:

>100_bases
GCAACCACGTTAGTAGAAAAAACCCGCTTCGGCGGGTTTTTTTTATGTCTGGTGAAACGTTGAAAGTGTAACGTTTAAAA
ACGCGCAACAAGTGCTCGCG

Product: cold-shock domain-contain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MATGTVKWFNESKGFGFISQDDGGADVFVHFSAITGSGFKTLAEGQKVSFEIQQGPKGPQAANVVAE

Sequences:

>Translated_67_residues
MATGTVKWFNESKGFGFISQDDGGADVFVHFSAITGSGFKTLAEGQKVSFEIQQGPKGPQAANVVAE
>Mature_66_residues
ATGTVKWFNESKGFGFISQDDGGADVFVHFSAITGSGFKTLAEGQKVSFEIQQGPKGPQAANVVAE

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI1786841, Length=63, Percent_Identity=74.6031746031746, Blast_Score=99, Evalue=6e-23,
Organism=Escherichia coli, GI1788126, Length=63, Percent_Identity=76.1904761904762, Blast_Score=96, Evalue=4e-22,
Organism=Escherichia coli, GI1789979, Length=64, Percent_Identity=67.1875, Blast_Score=90, Evalue=2e-20,
Organism=Escherichia coli, GI2367114, Length=64, Percent_Identity=65.625, Blast_Score=90, Evalue=2e-20,
Organism=Escherichia coli, GI1787839, Length=63, Percent_Identity=66.6666666666667, Blast_Score=88, Evalue=9e-20,
Organism=Escherichia coli, GI1787834, Length=64, Percent_Identity=65.625, Blast_Score=87, Evalue=2e-19,
Organism=Escherichia coli, GI1787107, Length=65, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983217, Length=66, Percent_Identity=46.969696969697, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71983225, Length=55, Percent_Identity=49.0909090909091, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24658520, Length=61, Percent_Identity=49.1803278688525, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7024; Mature: 6893

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGTVKWFNESKGFGFISQDDGGADVFVHFSAITGSGFKTLAEGQKVSFEIQQGPKGPQ
CCCCCEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCC
AANVVAE
CCCEECC
>Mature Secondary Structure 
ATGTVKWFNESKGFGFISQDDGGADVFVHFSAITGSGFKTLAEGQKVSFEIQQGPKGPQ
CCCCEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCC
AANVVAE
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]