| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ureB
Identifier: 110835581
GI number: 110835581
Start: 3077685
End: 3077990
Strand: Reverse
Name: ureB
Synonym: ABO_2720
Alternate gene names: 110835581
Gene position: 3077990-3077685 (Counterclockwise)
Preceding gene: 110835582
Following gene: 110835580
Centisome position: 98.65
GC content: 57.52
Gene sequence:
>306_bases ATGATTCCAGGCGAATACGCTATTCAGAACGGCGACATCGAGATCAATCCTGGGCGGGAAACGCTCAGCGTGGAAGTGGC CAATACGGGCGACCGTCCCATTCAGGTGGGCTCCCACTACCACTTCTATGAAGCTAACAATGCCCTGCAGTTCGACCGAG AAAAAACCCGAGGCTTCCGGCTCAATATTCCGGCCGGCACCGCCGTGCGCATTGAGCCAGGGCAGAGCCGGACAGTAGAG CTGGTGGCGTATGCGGGACAAAGAAAAGTGTACGGGTTTCAGGGCAAGGTCATGGGGCCGCTTTGA
Upstream 100 bases:
>100_bases ATCCACGAAGTGCAGGTGGAAGCGACCTTTCCCGATGGCACCAAACTGGTAACGGTTCACGACCCCATCGTTTAAGACGA TCCGCTATAGGAGAAGCCAA
Downstream 100 bases:
>100_bases GTCGCGCCTGTCTTTAGGGCCGAACTTGCCCGTGGAAATAGCGCCATGGGAAGCAGGCCGGCGCCTGTACAACACCGCAT TTCGGAAAGGCTGCCGATAA
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE LVAYAGQRKVYGFQGKVMGPL
Sequences:
>Translated_101_residues MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE LVAYAGQRKVYGFQGKVMGPL >Mature_101_residues MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFRLNIPAGTAVRIEPGQSRTVE LVAYAGQRKVYGFQGKVMGPL
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE2_ALCBS (Q0VKY0)
Other databases:
- EMBL: AM286690 - RefSeq: YP_694440.1 - ProteinModelPortal: Q0VKY0 - SMR: Q0VKY0 - STRING: Q0VKY0 - GeneID: 4211732 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2720 - NMPDR: fig|393595.12.peg.2729 - eggNOG: COG0832 - HOGENOM: HBG365918 - OMA: RIVYGFN - BioCyc: ABOR393595:ABO_2720-MONOMER - GO: GO:0005737 - HAMAP: MF_01954 - InterPro: IPR002019 - Gene3D: G3DSA:2.10.150.10 - TIGRFAMs: TIGR00192
Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta
EC number: =3.5.1.5
Molecular weight: Translated: 11179; Mature: 11179
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFR CCCCCEEEECCCEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEECCCCCCCEE LNIPAGTAVRIEPGQSRTVELVAYAGQRKVYGFQGKVMGPL EECCCCCEEEECCCCCCEEEEEEECCCCEEEEECCEEECCC >Mature Secondary Structure MIPGEYAIQNGDIEINPGRETLSVEVANTGDRPIQVGSHYHFYEANNALQFDREKTRGFR CCCCCEEEECCCEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCEEEECCCCCCCEE LNIPAGTAVRIEPGQSRTVELVAYAGQRKVYGFQGKVMGPL EECCCCCEEEECCCCCCEEEEEEECCCCEEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA